Jatropha curcas (Barbados nut): 105634346
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Entry
105634346 CDS
T03922
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105634346
Enzymes [BR:
jcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105634346
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
Helicases
105634346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
ATPase
AAA_19
ResIII
AAA_23
Motif
Other DBs
NCBI-GeneID:
105634346
NCBI-ProteinID:
XP_012072581
UniProt:
A0A067KP28
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MEVCIEDSCLEGDSNALIMPAKKRNKRKAINKDKGVQKNKNPKLSKSQERKLKKLEEENE
KSLLLKESIEALEKYKIPEDAFSLLQSSRNMSRVETVKEKRRMAIQFSKAGLEVSHSDEF
FKISVDGASWKTEAVPWQDLNTNDQPQPIVTNVANDSSDSLATGLELGSGNEQKSNCGSV
SAFSTEKFSGKENFKSSKEDIKISAPALHHCGSGKITQLMGKSDENLIGNLVQANNLPDC
TLQSPVAAPMVVHVVRPKEVEEKRKDLPIVMMEQEIMEAINEHSSVIICGETGCGKTTQI
PQFLYEAGFGSNQSVARGGIIGVTQPRRVAVLATARRVAFELGLQLGKEVGFQVRHDKRI
GDNCTIKFMTDGILLREVQNDVLLKKYSVIILDEAHERSVNTDILIGMLSRIIRLRQKKY
EEQRHMIFSGESISPQNMIFPLKLVLMSATLRVEDFVSGGRLFHNPPPVVEVPTRQFPVT
VHFSKRTEIVDYIGQAYKKVLSIHKRLPPGGILVFVTGQREVEYLCQKLRKASKQLIANT
VERNMGNKVSATSEMNSVEGINMKDINDAFEIQGNSTGEQTDKYSSYDKDMQHTNGDEPD
DLYDSETDSELEIAGDDGDLGDNDILENDGNLLGALEGEGSLASLKAAFEVLAGKTTSDP
NSEGNQIPSMLKGCLEQSNHILGGKKGGDVCVSVGALHVLPLYAMLPAAAQLRIFEEVKE
GERLVVIATNVAETSLTIPGIKYVVDTGREKVKNYNPSNGMETYEIQWISKASAAQRAGR
AGRTGPGHCYRLYSSAVFNNIFQDFSYAEICKVPVDSIVLLLKSMSIDKVENFPFPTPPE
FTAMMEAERCLKTLEALDSNGRLTPLGKAMAYYPMSPRHARMLLTSIKIMRKVKTYARAN
LVLGYAIAAAAALSLSSPFLMQFEGSHDSSNGLEQNGMAKCMDDNKDLDKQEKLRKKKLK
ETAKISRAKFSNPTSDALTIAYALQCFELSNNPMEFCSENSLHLKTMEEMSKLRKQLLQL
VFNQNVDHRFKQEFSWTHGTMGDVEQAWMTPSGRNPLLMNEEELLGQAICAGWADRVAKR
IRGNSRSSEGDRKVNSVRYQACMVKETVFLHRWSSLSSSAPEFLVYSELLHTKRPYVHGA
TSVKSKWLVKYAGSLCSFSDVEDPKPYYEPQTDQVYHWVIPTFGPYLWQLPLYSVSVTSD
VDRVKVFAYALLEGHVLPCLSSVRNFMAARPSIILGQEAVGERRVGDLMYKLKTLSIDSC
AMLREVWKENPNELHSEILHWFKKSFHDHFGALWTQMHVEVQLEPHERFLKKVKKDKKKK
DMGS
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgtgtattgaagattcatgtttggaaggtgatagcaatgcattgatcatgcct
gcaaagaaacgtaacaaaagaaaagccatcaataaggataaaggagtccaaaaaaataaa
aacccaaagttgagcaaatcccaggaaagaaagttgaagaagttggaggaggaaaatgag
aaatcacttttgctcaaggaaagcattgaggcattagagaaatacaagataccagaggat
gccttttcacttctgcaatcatcaaggaacatgagtcgagttgaaactgtgaaagaaaaa
cgcagaatggcaatacaattttccaaggcaggtctagaagtttcacatagtgatgagttt
ttcaagataagtgttgatggtgcatcttggaagaccgaagctgtaccatggcaggatcta
aacacgaatgaccaaccacagccaattgtaacaaatgttgcaaatgattcttctgattct
ttggccaccggtctagagctaggtagtggcaatgaacagaagtccaattgcggatcagtt
tctgccttctcaactgaaaaattttctggaaaggaaaatttcaaatcgagtaaagaggac
attaagatttctgctccggctctacatcattgtggttctggaaagatcacacagttaatg
ggaaaatcagatgagaacttaattggaaatttggtccaggctaacaatttaccagattgc
acattgcaaagtcctgttgctgccccaatggtggtgcatgttgtaaggccaaaggaggta
gaagagaaacgaaaggatcttccaatagttatgatggagcaggagataatggaagctata
aatgagcattctagtgttattatctgtggagaaactgggtgcggaaagaccacacaaatt
cctcagttcctttatgaagcaggctttggttcaaaccaatctgttgctcgaggtggtatt
attggagttactcaaccacgacgtgtcgctgtcctcgctacagctagacgtgtggcattt
gagctgggtctccaacttggtaaggaggttggttttcaagtgaggcatgacaagaggatt
ggggacaactgtactatcaaatttatgactgatggaattttactacgagaagttcagaat
gatgttctattgaagaaatactctgttataattctggatgaggctcatgagagaagtgtg
aacacagacatactcattggaatgctttctcgtatcattcgacttcgccagaagaagtat
gaggaacaacgacatatgatattttctggagaaagcataagcccccaaaatatgatattt
ccactcaaacttgttctaatgagtgccaccttgcgagtggaagattttgtttctggggga
aggttatttcataaccctcctcctgttgttgaagttcccaccagacaatttccagtaacg
gtacatttctcaaagagaacagaaattgtggattatattggccaagcctataaaaaggtc
ttgtcaatccacaagaggctgccaccaggtggcatacttgtctttgtcacagggcagaga
gaggtggagtacttgtgccagaaattacgtaaagcttcaaaacaactgattgctaatact
gttgaacggaatatggggaataaggtctctgccacatctgaaatgaattctgttgaggga
attaacatgaaggacataaatgatgcatttgagattcaagggaactcaactggtgagcaa
actgacaaatatagctcctatgacaaagatatgcaacatactaatggggatgaaccagat
gacctttacgattctgaaacagatagcgaactagaaattgctggtgatgatggagattta
ggagacaatgacattttggaaaatgatggtaaccttttaggtgctttagaaggggagggg
agtcttgcctcgttaaaggctgcttttgaagtattggctggaaaaactacatcagaccct
aattctgagggaaaccagattccttctatgttgaaaggctgtttagagcaatccaaccac
attttaggggggaagaaaggaggagatgtatgtgtctctgttggagctttacatgttctt
cctctttatgcaatgcttcctgctgcagcacagcttcgcatatttgaagaggtcaaggaa
ggggagcgacttgttgttattgccactaatgttgctgagacttctctgactattccgggc
ataaagtatgttgttgatactggaagggaaaaggtgaagaactacaacccctctaatggc
atggaaacatatgaaatacagtggataagtaaagcatcagctgctcaacgtgccggaaga
gctgggagaactgggcctggccactgttaccgcctctattcatctgcggtgtttaataat
atatttcaagacttctcttatgctgaaatctgtaaagtgcctgttgatagcattgttctt
ctcctgaaatccatgagtattgataaggtagaaaattttccatttccaactcctccagag
ttcactgccatgatggaagcagaacggtgcttaaagactcttgaagcacttgatagcaat
ggaagattgacacctcttgggaaggccatggcttattatcccatgagtcctcgccatgct
cggatgcttcttacttctatcaaaattatgagaaaggtcaaaacttatgctagagcaaat
ctggttcttggatatgcaattgctgcagctgcagcattgagcctgtctagtccttttctc
atgcagtttgaaggaagtcatgatagtagcaatggcctagagcagaatggaatggctaaa
tgcatggacgataataaagacttggacaagcaagaaaaattaaggaaaaagaaacttaaa
gagacagctaaaatatctcgagcaaaattttcaaaccctaccagcgatgctctgactata
gcttatgcattgcagtgttttgaactttccaacaacccaatggaattctgctctgaaaat
tccctacatcttaaaaccatggaagaaatgtccaagctaagaaagcagcttcttcaatta
gtctttaatcaaaatgttgatcacaggttcaagcaggagttttcatggactcatggaaca
atgggggatgtagaacaagcttggatgacaccctccggtaggaacccgcttttaatgaat
gaggaggagctcttaggccaagctatttgtgctggttgggctgatagagttgccaaaaga
atcagaggaaattcaaggtcatctgaaggagatagaaaagtaaattcagttcgctatcaa
gcctgcatggttaaagaaactgtgttcctccatcgttggtcatctctttctagttcagcc
cctgaatttttggtgtacagtgaattgctgcatacaaaacgaccatatgttcatggagcg
acaagtgtgaaatcaaaatggcttgttaaatatgctgggtctttgtgcagtttttctgat
gttgaggaccctaaaccttattatgagcctcaaactgaccaagtatatcactgggtcatt
ccaacttttgggccttacctttggcagttgccattatacagtgtatcagttaccagtgat
gtggatcgtgtgaaggtatttgcttatgctttactcgaaggccatgttttgccatgctta
agctctgtccgtaattttatggcagctcgtcccagtatcattttgggccaagaggctgta
ggtgaaagacgggttggcgaccttatgtataagttaaagacattgtcgattgatagttgt
gcgatgctaagagaagtatggaaagagaatcccaatgaattgcattcagaaattttacac
tggtttaagaagagctttcatgatcattttggagcactttggacacagatgcatgttgaa
gtacaattagagcctcatgaacgctttcttaagaaggtgaagaaggataaaaagaaaaag
gatatggggagctag
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integrated database retrieval system
