Jatropha curcas (Barbados nut): 105634419
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Entry
105634419 CDS
T03922
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1 isoform X1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105634419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105634419
Enzymes [BR:
jcu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
105634419
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
Other 90S particles
105634419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Nop14
MCM_bind
NPR3
Spore_coat_CotO
Motif
Other DBs
NCBI-GeneID:
105634419
NCBI-ProteinID:
XP_012072669
UniProt:
A0A067L159
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MVRPYGVKGQKRKKRKERYDKEEDVDEQSIQEAKRAMTSKAEMGTQSSEEEEEEEEETEK
EQEQEEKKESDAQADEIEGIPIVPSDPNVKKPGIIFVLEKASLEVAKVGKTYQILNSDDH
ANFLRKNNKNPADYRPDIVYQALLSILDSPVNKAGRLRAVYVKTEKGVLFEVKPHVRIPR
TYKRFSGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPANSRKIGFSFSSEKLVKIRK
YVDAIGDDTDLVFVVGAMAHGKIDCDYIDDFIAISGYPLSAAWCISKICEAVADKWNVI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtaaggccatatggggtaaaagggcagaagcggaagaagagaaaggagagatatgac
aaagaggaagatgtggatgaacaaagcatacaagaggctaagagagctatgacatcaaaa
gctgaaatgggtactcaaagcagtgaagaagaagaagaagaagaagaagaaacagaaaag
gaacaagaacaagaagaaaagaaagaatcagacgcgcaagctgatgaaatagaaggaatc
ccaattgtcccaagtgatcctaacgtgaaaaagcctgggatcatttttgtgctcgaaaag
gcctcattggaagttgcaaaagttggaaagacttaccaaatcttgaattctgatgatcat
gcgaatttcctgagaaagaataataaaaatcctgctgattataggcctgacattgtttat
caggctctcttatcaatcttagacagcccagtgaataaggctgggaggttgcgagctgtg
tatgtgaaaacagaaaaaggtgttctttttgaagtgaaaccccatgtgcgtattccaagg
acgtacaagcggttttccggaattatgttgcagttgcttcaaaaactaagtataactgct
gttgggaagcgtgagaaacttctgcgagtaatcaagaatcctgtgacccagtacctgcct
gccaattctcgtaaaatagggttctcatttagttcagaaaagttggttaaaatccgcaag
tatgtagatgcaattggtgatgatacagatcttgtttttgtggttggtgcaatggcccat
ggaaaaattgattgtgattatatagatgatttcatagcaatttctggatatccattgagt
gctgcctggtgtatttcaaagatttgtgaggccgtggctgacaaatggaatgtaatataa
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