Jatropha curcas (Barbados nut): 105634697
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Entry
105634697 CDS
T03922
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105634697
03036 Chromosome and associated proteins [BR:
jcu03036
]
105634697
Enzymes [BR:
jcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
105634697
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105634697
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
105634697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
105634697
NCBI-ProteinID:
XP_037492966
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MSVFLEILRCILCCVEDRGDEYEYETLYGNNSGETITPNIYRVGFGSRSSNPTNFEPTYV
ETVKRIDDVHSASSIYAKYEPISSYSPHTSSSMLQQPSSTKLTYSSSPTLSRSEPPKSSS
NQNQSLTSHLSSSKTLSFAPSTSSKPCTKEAKVSPSSKPIPKASLSSSESSPSSFKHPPS
FKLTLTPAFSNVTNQQTKAANKQVEKNTSPILKFQTSHSEPSPLQLWLAPTSPNGTNEHS
KANYIWVQKDALPIYAIPKDIQDLIKKDKVPGVLKRPLCVSTYKDYFAALLYAEDFYIEQ
WSKFKLLGITLKLQEATIKWSYFTDSDDKDDRIFVEFKIDAAREKRPFLLSRDFVFAKPS
GSNIEPFQGIIYRVVKSTTVLVEFGKGFHSQHYSSRKYDVSFSFNRVCLKRGHQAIEAAS
HPTFESFTFPSFRSRRLISASSPSYFNYKLDTDQMSAVQQIIKFHGSPPYLIEGPLCVTK
EKRNEPKALSRTGLVIQEAMLQIYKKSRDHRILVCAPINSTCDLLTRSLKKYIPESDIFR
GNAAFREIDGVPLDILPSCVLKGECFACPPLQELQKFRVIVSTYVSSFRLHNKGIMAGHF
SHIFVVDASSATEPEAMIALANFATDDTTVIVTGAQGNRSGWVRSDIARENGLRESYFER
LHEKIASNSVNKSLFLAQIDNPKSNCKSDNDAYSLVSYSIL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtttcttgaaatcttgaggtgtattctttgttgtgttgaggatcgtggagat
gaatatgaatatgaaacattatatggaaataattcaggtgaaacaattactcctaatata
tatagggtaggattcggttcaaggtcaagtaatccgacaaactttgaaccaacatatgtt
gagacagtaaaaagaattgatgatgtgcatagtgcttcaagtatttatgcaaaatatgaa
cctatatcttcatatagtccacacacatcttcctctatgctacaacaaccttcatctact
aaactcacatattcttcaagtccaactctgtcgagatctgaaccgccaaaatcttcttct
aaccaaaatcaatcactaacatcacacttatcttcttctaaaacattatcttttgcacca
tcaacttcatcaaaaccttgcactaaagaagctaaagtatcaccatcttctaaacctatt
cctaaagcatcactatcttcctcggagtcttctccatcatcctttaagcacccaccatct
tttaaactaactttgactccggctttctcaaatgtgaccaatcaacagacaaaagccgcc
aacaaacaggttgaaaagaatacatcacctatcctaaaatttcaaacatcacactctgag
ccatctccacttcaactctggctggctccaacttccccaaatggcacaaatgagcattca
aaagcaaactacatatgggttcaaaaggatgcattacctatttatgcgattcctaaggat
atacaagacttgatcaagaaagacaaagtacctggagttttgaaaaggccattgtgtgtc
tcaacatacaaggactattttgctgctcttctatatgcagaggacttttatattgagcaa
tggagtaagttcaaattgttgggcatcactttaaagttgcaagaagctacaattaaatgg
tcatacttcacagacagtgatgataaggatgatagaatatttgtggaatttaagattgat
gcggcacgtgagaaacggccatttcttttatcaagggactttgtctttgcaaaaccttca
ggaagtaatattgagccatttcagggtataatctatcgagtggtgaaaagcactactgta
ttagttgaatttggtaaaggttttcattctcaacattattcgtctcgcaaatatgatgtt
agcttctcatttaacagagtttgtttaaaaaggggacatcaagcaattgaagctgcttcg
catcctacatttgaaagtttcactttccctagttttcgctccagaaggctcatttctgcc
tcatctccttcctattttaattataaacttgatacagatcaaatgtcagcagttcaacag
atcataaaattccatggttcgccaccttatcttattgaaggtccactttgtgtaactaaa
gaaaaacggaatgagcctaaagcattatcaagaaccggattggttatccaagaagcaatg
cttcaaatttataaaaagtctcgagatcatcggattcttgtatgtgcacctatcaacagc
acatgtgatttgctaacaagaagcttgaagaagtacattcctgaatcggatatatttcga
ggaaatgctgcttttcgggagatagatggcgtacctcttgacattctcccttcatgtgtt
ttaaaaggtgaatgctttgcttgtcctccacttcaagaactccaaaaattcagagtaata
gtgtctacttatgtaagtagctttcggctgcacaataaaggcatcatggctggtcatttt
agtcacatttttgtggtggatgcctcatcagctactgagccggaagcaatgattgcttta
gctaattttgctactgatgacactactgtaatagtcactggtgcacaaggaaaccgttcc
ggttgggtacgttctgatattgctagggagaatggactgagggaatcatactttgaaaga
cttcatgaaaaaattgcaagcaatagtgttaataaatcgttgttccttgcacagattgac
aatccgaaatcaaattgcaaatcggataatgatgcctacagcttagtttcatactccatt
ctgtaa
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