Jatropha curcas (Barbados nut): 105634823
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Entry
105634823 CDS
T03922
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105634823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105634823
Enzymes [BR:
jcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
105634823
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
105634823
DNA repair and recombination proteins [BR:
jcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105634823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
105634823
NCBI-ProteinID:
XP_012073135
UniProt:
A0A067KPV9
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MPELPEVEAARRAIDDHCLGKKIKKAIIANDPKVIDGVSPSDFEAALVGKTLIAALRKGK
NLWFQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDTDEWPSKYSKLFIELDDGLEL
SFTDKRRFAKVRLLKDPASVPPISELGPDALLEPMTVDEFYESLSKKKIAIKALLLDQSF
ISGIGNWIADEVLYQARIHPLQVASSLSRENCATLCKCIREVIEKAIEVGADSNQFPNNW
IFHSREKKPGKAFVDGKKIDFITVGGRTTAYVPELQKLSGGQVAKAADKQKRQTSKRKKA
KDDDEGEDAANGTASEEEDTAKKAKTKRELKPRGHAKKPPAKRKSEDIDHNDEGEDDANQ
LASEEEAAAEKAKTKSEVKPRAHAKKPPTKLKSKASDDEDDNGAASDDGDDAEDNVHVEN
QKKKPQRVANKKQTKEKKVTNKKVANQNSKKPKK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctaccggaggtggaggcggcgagaagggccatagatgatcactgcttaggc
aagaagattaagaaggctattatagcaaatgaccctaaagtcatcgacggtgtctctcct
tctgatttcgaggctgcactagtgggcaaaaccttaattgctgctcttcgcaaggggaag
aatctctggtttcagctcgattcccctcctttcccttcatttcagtttggtatggctggt
gctatatatattaagggagttgctgttaccaaatataagaggtctgctgtgaatgacact
gatgagtggccatccaaatattcaaagctatttattgaactagatgatggcctagagctt
tctttcactgataagaggcgatttgctaaagtccgcttgctcaaagatccagcttctgta
cctccaatttctgagctcggccctgatgcattattggagccaatgacagttgatgaattt
tatgaatccttaagcaagaagaagattgcaattaaggctcttttactcgatcagagtttt
atttctggtattggcaactggattgcagatgaagtgctataccaagctagaattcatcct
ctgcaagttgcttccagcttgtccagagaaaattgtgcaacattatgcaagtgcatcagg
gaggttattgaaaaagcaatagaagttggggcagatagtaatcagtttcccaataattgg
attttccattctcgcgaaaagaagcctgggaaggcttttgttgatgggaagaaaattgat
tttatcactgttggtggaaggacaacagcctatgtaccagaattgcaaaagctgagtgga
ggccaagttgcaaaagcagcagataaacaaaaaagacaaacttcaaaaaggaaaaaggcc
aaggatgatgatgaaggtgaagatgctgcaaatggaacagcaagcgaggaagaagatact
gctaaaaaggccaaaacaaagagagaactgaagcctagaggtcatgccaagaagcctcca
gcaaagcggaaatctgaggatatcgatcataatgatgaaggcgaagatgacgcaaatcaa
ctagcgagtgaggaagaagctgctgctgaaaaagctaaaacaaagagcgaggtgaagccg
agagctcatgccaagaagcctccaacaaaactcaagtccaaggcaagtgatgatgaagat
gacaatggtgctgcttctgatgatggtgatgatgcagaagacaatgttcatgtggaaaat
caaaagaagaaaccacaaagagtggccaataagaagcaaactaaagaaaaaaaggtgacc
aacaagaaggttgccaatcaaaacagtaagaagccaaagaagtga
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