Jatropha curcas (Barbados nut): 105634996
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Entry
105634996 CDS
T03922
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105634996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105634996
03041 Spliceosome [BR:
jcu03041
]
105634996
03036 Chromosome and associated proteins [BR:
jcu03036
]
105634996
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105634996
Spliceosome [BR:
jcu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105634996
Complex B
105634996
Complex C
U2 SnRNP specific factors
105634996
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105634996
TFTC complex
105634996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
105634996
NCBI-ProteinID:
XP_012073366
UniProt:
A0A067LMR5
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MYLYSLTLQRATGIVSAINGSFSGGKSQEIVVARGKVLDLLRPDENGKLQTILSVEIFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIAYSICGVDCGFDNPI
FAAIELDYSEADLDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNEGHPDVRAVIPRRADLPAERGVLIVSAATHRQKSMFFFLLQ
TEYGDIFKVTLDHDNDKVKELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHGLYQFKAI
GEEADVEASSATLMETEEGFQPVFFQPRGLKNLVRIDQAESLMPIMDMKVANLFDEETPQ
IFSLCGRGPRSSLRILRPGLAISEMAVSQLPGVPSAVWTVKKNFNDEFDAYIVVSFNNAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDITGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSPPESLLFLEVQASIGGEDGADHPASLFL
NAGLQSGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSIIVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEFSASFSSDQCAEGVVAVAGDALRIFTIERLGETFNETAIPLRYTP
RKFVLQPKKKLLVIIESDQGAYTAEEREAAKKECFEAAGMGENGSASADQMENGGDDEDK
DDPLTDEQYGYPKAESEKWVSCIRILDPRTAATTCLLELQDNEAAFSVCTVNFHDKEHGT
LLAVGTAKGLQFWPRRSLVAGFIHIYKFVDDGRTLELLHKTQVEGVPLALCQFQGRLLAG
IGSVLRLYDLGKKRLLRKCENKLFPNTIVSLHTYRDRIYVGDIQESFHFCKYRRDENQLY
IFADDSVPRWLTASYHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGKIKWEQGKL
NGAPNKVEEIVQFHVGDVVTSLQKASLIPGGGECIIYGTVMGSLGALLPFTSRDDVDFFS
HLEMHLRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPLDAQRKIADELDRTPG
EILKKLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttacagcctcacgcttcaacgagctaccggcatcgtctccgctatcaatggc
agtttctccggtggcaagtctcaagaaatcgttgtagctcgcggcaaagttctcgatctt
ctccgccctgacgagaacggtaagcttcaaaccattctgtctgttgaaatcttcggtgct
attcgctctctagctcagtttagactaactggatctcagaaggactatattgttgttggg
tcagattcgggaagaattgtaattcttgaatataacaaggaaaggaatgttttcgataaa
atacaccaggaaacttttgggaaatctgggtgtcgccggattgttcctggtcaatacttg
gccattgacccgaaaggaagagctgtaatgataggtgcctgtgagaaacagaagttagtt
tatgttttgaatagggatactgctgctaggttgacgatttcctcgcctttagaagcacac
aagtctcacacaatagcgtattcaatttgtggtgtggattgtggatttgacaacccaata
tttgccgctattgagttggattattcagaggcggacctggattctactgggcaggctgcc
agtgaggcgcagaagcatttgacattttatgagcttgatttaggtcttaatcacgtgtct
aggaagtggtctgaacaggttgataatggggctaatatgcttgttacggtgcctggaggc
ggggatggacctagtggagttttagtttgtgctgagaattttgtgatttataagaatgag
gggcatccagatgtgagggcagtgattccaaggcgtgctgatttgcctgctgagcgagga
gttctgatagtttctgcagctactcataggcagaagtctatgtttttctttctgttgcag
actgaatatggtgatatttttaaggttacattggatcatgataatgacaaagtcaaggag
ttgaagatcaagtattttgatacaattcccgttactgcttcaatgtgcgttttgaaatca
gggtttttgtttgctgcgtcggagtttgggaatcatggtttgtatcagtttaaggcaatt
ggggaggaagctgatgtggaggcctcatcagctactttaatggagactgaggagggtttc
cagcctgtttttttccaaccaagggggttgaagaatcttgttaggattgatcaggctgag
agcttgatgccaattatggatatgaaggttgctaatctttttgatgaagaaacacctcag
atattttctctttgcgggcgtggtcctcggtcatcgttgaggatactgaggccaggtttg
gccattagcgagatggctgtttcacagcttcctggtgtaccgagtgcagtgtggactgtg
aaaaagaattttaatgatgaatttgatgcatatatcgttgtgtctttcaacaatgcaact
ctcgtgctttcaattggagagacagttgaggaagtgagtgacagtgggtttcttgatact
acgccttcacttgctgtttctttgattggtgatgattctttgatgcaagttcacccaaat
ggtattaggcatataagggaagatgggcgtataaatgaatggagaactccaggaaagaga
acgattgtgaaggttggctccaatagacttcaagtggttattgctttaagtggaggggag
cttatatattttgaggttgatattactggtcagctaatggaggtggagaagcatgagatg
tcaggagatgttgcctgtttggatatagccccggttccagaaggaagacagaggtcccga
tttcttgctgttggttcatatgacaacactatccgtatcctatctttggatcccgatgac
tgtatgcagattctgagtgttcaaagtgtttcatcacctccagaatccctcctctttctt
gaggttcaggcatcaataggtggggaggatggtgctgatcaccctgctagtcttttcctt
aatgccggtttgcagtctggagttctattcaggacagttgtggacatggttacaggccag
ctttctgactctcgttctcgattcttgggactgagggcaccaaaactcttctccattatt
gtgagaggccggcgtgcgatgttgtgcttatcaagtcgtccctggcttggttatattcac
caagggcatttccttttgacacccctctcctatgagacccttgaattttctgcttcattc
tcatctgatcagtgtgcagaaggtgtggtcgctgtagctggagatgcattgaggattttt
accattgaaaggttgggagaaacattcaatgaaactgcaatacctctaaggtacactcca
agaaagtttgtgcttcaacctaagaagaaacttttggttattattgagagtgatcaagga
gcatatacagcagaggagcgtgaagcagccaaaaaggagtgttttgaggctgctgggatg
ggggaaaatggaagtgccagtgctgatcagatggaaaatggtggtgatgatgaggataaa
gatgatcctctcactgatgagcagtacggttatccaaaggcagaatcagagaagtgggtt
tcttgcatcagaattcttgacccaagaacagcagccacaacttgtctgctggagcttcag
gacaacgaagctgcatttagtgtttgcactgtaaatttccatgacaaggagcatggaact
ctcttagctgttggtactgccaagggactccagttttggccaagaagaagtttagttgct
ggatttattcatatttataagtttgtggacgatgggagaacgctggaacttttgcacaag
acacaagtggagggtgtaccgcttgctttatgccagtttcagggaagactacttgctgga
ataggatctgttctcagactgtatgacttggggaagaagaggttgcttagaaaatgtgag
aataagcttttccccaacaccatcgtctctcttcacacctatcgtgataggatctatgtc
ggtgatattcaagagtcattccatttctgcaaatacaggagggatgagaatcagctctat
atatttgctgatgatagtgttccaagatggcttactgcatcataccacatagattttgat
actatggcaggtgcagacaagtttgggaatgtctatttcgtgcggttgccacaagatgtt
tctgatgagatagaggaagatccaactggtggaaagataaagtgggaacagggcaaactt
aatggtgctccaaacaaggtagaggagatagtacagtttcatgttggtgatgtggttact
agcctgcagaaggcatcactaattccaggcggtggagaatgcatcatttatggaacagta
atggggagcttgggggcactgcttccgttcacttctagagatgatgttgacttcttttca
cacttggagatgcatttgagacaggatcacccacctctatgtggaagagaccatatggca
tatagatctgcttattttccggttaaggatgtgatcgatggagatctatgcgaacagttc
ccaactctaccccttgatgcacagagaaaaattgctgatgaattagatagaactcctggg
gagatactgaagaaacttgaagaagttaggaataagatcatttaa
DBGET
integrated database retrieval system
