Jatropha curcas (Barbados nut): 105635053
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Entry
105635053 CDS
T03922
Name
(RefSeq) probable polygalacturonase At1g80170 isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Module
jcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105635053
Enzymes [BR:
jcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105635053
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
105635053
NCBI-ProteinID:
XP_020535337
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MHWMQVLFTILYVLTILSIMSSVISSPINHYNVLSYGAVGDGNEDDTQAFVEAWNAACHC
DEDTPRLVVPEDKTFLVNPINFLGPCKSGNIEVVLSGTIIAPDGSNPWMENNVGRWLAFR
DVHGLNITGDGMLDGRGERWWDFCKHHRVKSCNRLAPWILGFSNCTDVHMRGINTARSGG
GHIFIFGCENVDLAFLNIQAPATSPNTDGIHISHSSFIYIDQCTIGTGDDCISMVDRTYN
VNITNVDCGPGHGISIGSLGANGEVVDVQNITIRDINFYGTTNGARIKTCRAGRGRVQDV
YFYNINVTEVKNPIIIDQHYGEKKSHSTKMRAGVHISDVQFFGFFGTSKSKVAIDLNCSE
NVPCTNLSLGNIRLGPAESGEVTSTCNNAFGSTYGVVRPKSCLRYQRESN
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcattggatgcaggttctatttaccattctctatgtcttgaccatactctctataatg
tcaagtgttatctcgagtcctatcaatcattataatgttttaagttacggagcagttggt
gatggaaatgaagatgacactcaggcatttgttgaggcatggaatgctgcttgtcattgt
gatgaagacacacctagattggttgttcctgaagacaagacatttttggtgaatcctatc
aactttttaggcccttgcaagtctggaaacatcgaagttgtgctatcaggaacaattata
gctcctgatggttccaatccctggatggaaaataatgttggaagatggttagcttttcga
gatgtacatgggctaaatataactggggatggcatgctagatggtcgtggagagagatgg
tgggatttttgcaaacatcatcgagtaaaaagttgcaacagacttgctccttggatactc
ggtttttcgaattgtactgatgttcacatgagaggaattaacactgcacgaagtggtgga
ggtcatatattcatctttggttgcgaaaatgttgatcttgcattcttgaatatacaagca
cctgcaacgagccctaacacagatggtattcatatttcacattcaagttttatatacatt
gaccaatgtactattggcactggcgacgattgcatttccatggtagatcgtacatacaat
gttaacataacaaatgttgattgtggacctggtcatggtataagtattggaagcttaggt
gcaaatggagaagttgtagatgttcagaacataactattagagatattaacttctacgga
acaactaatggtgcaaggatcaagacatgtagggccgggagaggtcgagttcaagatgtt
tatttctataatataaacgttacagaagtgaaaaatccgattattattgaccaacattat
ggtgaaaaaaaatcacattcaacaaaaatgagagcaggagttcacataagcgatgtgcaa
ttttttggattctttgggacatcgaagagcaaagtggctatcgatctgaactgcagtgag
aatgtgccttgtaccaatctcagtttgggaaatattagattgggacctgcagaatcagga
gaggtcacttctacctgcaataatgcttttggatcaacctatggagttgtgaggcccaag
tcttgtctgagataccagcgggaaagtaattaa
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