Jatropha curcas (Barbados nut): 105635174
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Entry
105635174 CDS
T03922
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105635174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105635174
03036 Chromosome and associated proteins [BR:
jcu03036
]
105635174
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105635174
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105635174
PBAF complex
105635174
GBAF(ncBAF) complex
105635174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
105635174
NCBI-ProteinID:
XP_012073569
UniProt:
A0A067KP50
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MASQASASFKDPPGPSNATPPSLKPKLPQPSVVSGVAATTPSPIKPEVPTPSTAVQRPPL
APPSPDADVVQIPSYSRWFSWNSIHECEVRFLPEFFDSRSPSKNPKNYMYYRNSIIKHFR
HNPSGKLTFTEVRKTLVGDVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDKDSKSTLQG
GADGGGSLADSTPPKRDSSKRLCSGCQSVCTIACFVCDKYDLTLCARCYVRGNYRVGVSC
SDFRRVEISEEIRTEWTEKETLQLLEAVTHYGDEWKKVALHVPGRSEKDCVTHFLKLPFG
EEFSGYAELGEPCSKYDQIKSCSNSDCGSESIGSSSACKRMRLTPLADASNPIMSQAAFL
SALAGTEVAEAAARAAVTALTEIEYGASKGNIESLSRNTRQQVAGVAANGDTNLNALEGA
SLDANSLPENEEVDAEKAISKIIEVQMKEIQDKIVHFEELDLLMEKEWQQLEQIKNLLFV
DQLALLFHKKSTSKTGERVEENVRTD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacaagcatcagcatcctttaaagacccgcccggaccatccaacgcaactccg
ccatctctcaagcccaagcttccccaaccttccgttgtatccggcgtcgctgccaccacg
ccctctcccatcaagcccgaggttccgacgccctccactgccgttcaacggccaccgctt
gcgcctccctctcctgatgccgacgtggtccaaatacctagctactccaggtggttttcg
tggaatagcattcacgagtgcgaggtccgattccttccagaattcttcgattcgcggtcg
ccttctaaaaaccctaagaattatatgtactacaggaactctatcattaagcatttcagg
cacaatccttcgggtaagctcaccttcacagaggttaggaagacgcttgtcggcgatgtt
ggctccattcgcagggtttttgacttcctcgaagcttggggtttgattaattattcgcct
tcagctttgaataagcccttgaagtgggaagacaaggactctaagtctactttgcagggc
ggtgctgatggtggaggcagtttagctgattctactcctcctaagagggacagttccaag
agattatgtagcggttgccagtctgtctgcaccattgcctgctttgtttgtgacaaatat
gacttgaccctttgtgcccgctgctatgtccgaggaaactaccgtgttggtgtcagctgc
tctgatttcaggcgggttgagatcagtgaagaaataaggacagaatggacagaaaaagag
acattgcaacttctggaagccgttacacattatggtgacgagtggaaaaaggttgcactg
catgttcctggtagaagtgagaaggactgtgttactcattttctcaaacttccttttgga
gaagagtttagtggttatgcagaattgggagaaccttgtagcaagtatgaccaaataaag
agctgtagcaactctgactgtggatcagaaagtattggctcctcatctgcatgtaaaagg
atgcgcctaacacctcttgcggatgcaagcaacccaataatgagtcaggctgcttttcta
tcagctctggcgggtacagaggttgcagaagctgctgctcgggcagctgtaacagctttg
actgaaattgaatatggagcaagtaaaggcaatattgaatctctttccaggaatacaaga
caacaagttgctggtgttgccgctaacggtgacaccaatctaaatgcattggaaggagct
tcactagatgctaattcactgcctgagaatgaagaggtagatgcagagaaagcaatttcc
aagattatagaagtgcagatgaaagagatccaggataagattgttcattttgaggagttg
gatttgctgatggaaaaagagtggcaacagttggaacaaattaaaaatttgctatttgtt
gaccagcttgccctgttgtttcataaaaaatcaacatcaaagactggggaacgagtggag
gaaaatgtaagaacagattga
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