Jatropha curcas (Barbados nut): 105635314
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Entry
105635314 CDS
T03922
Name
(RefSeq) vacuolar protein sorting-associated protein 35B isoform X2
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105635314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jcu04131
]
105635314
Membrane trafficking [BR:
jcu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
105635314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Spidroin_MaSp
Motif
Other DBs
NCBI-GeneID:
105635314
NCBI-ProteinID:
XP_012073762
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MILDGIEDEEKWLAEGIAGVQQNAFYMHRALDANNLREVLKYSALMLSELRTSKLPPHKY
YELYVRAFDELRKLEIFFTDESRHGVSVVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
VSAKDVLGDLVEMCRGVQHPMRGLFLRSYLAQVTRDKLPNFGSEYAGDTNTAMDAVEFVL
QNFIEMNKLWVRMQYQGPARVREKQEKERSELRDLVGKNLHVLSQIEGVDLEVYRDTVLP
RVLEQVVNCKDDLAQYYLMDCIIQVFPDEYHLQTLDTLLGACPQLQPTVDVKTVLSQLME
RLSNYAASSEDVLPEFLQVEAFTKLSSAIGKVIEAQVDMPIFGATTLYLSLLTFTLRVHP
DRLDYVDQVLGACVKKLSELPKLEDSRAIKQIVALLSAPVERYNNVVTALTLSNYPRVMD
RLDNETNKLMAMVIIQSIMKNNTCISSADKVEVLFELIKGLIKDLNGTTVDELDEEDFKE
EQNSVARLIHMLYNDDPEEMLKIICTVRKHVMVGGPKRLPFTVPPLIFASLRLIRQLNSQ
DGEVVGEELPATPKKIFQLLNQTIEALSSVPSPELALRLYLQCAETTHPQAANDCDLEPV
AYEFFTQAFVLYEEEIVDSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLK
KPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVTSGSNGPVILF
VEILNKYLYFFEKGNPQVTSAVIQGLVELINTEMQSDSSTPDPAAKAFFACTLRYIQFQK
QKGGAMAEKYEPIKV
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagacggaatagaagacgaagagaaatggcttgcggaaggaattgccggagtt
caacaaaacgccttttacatgcatcgcgctttggatgccaacaacctcagagaagttctt
aaatactctgctctgatgttatccgagctccgaacttcgaaactcccacctcataaatac
tatgaactctatgtgagagctttcgatgaattgaggaagttggagatattcttcacggac
gagagcagacatggagtttcagttgttgatttatatgaacttgtgcagcatgctggcaat
atattgcctagactgtatttgctatgtacggtaggatcagtatacatcaaatcgaaggag
gtctcggctaaggatgtgcttggggatcttgtggaaatgtgtcggggtgtccaacatcca
atgcgtggattgtttcttagaagttaccttgctcaagttactagagataaattgcccaac
tttggttccgaatatgcaggagatactaacacggccatggatgctgtagaatttgtgctg
caaaattttattgagatgaataaactgtgggttcgaatgcagtatcagggacctgctcga
gtaagagagaagcaggaaaaggaaagaagcgagctgcgtgatcttgtagggaaaaatctc
catgttcttagccagatagaaggtgtggacctcgaagtttacagagacactgtacttccc
cgagttttagagcaggttgtcaactgtaaagatgatcttgcacaatattatttgatggat
tgcataatccaggtctttccagatgaataccacttgcagacccttgacacattactgggg
gcctgcccgcagcttcagccaacagttgatgtcaagacagtgctatcgcaattgatggag
agattatcgaattatgctgcttccagtgaagatgttttacccgagttcctacaagtagaa
gctttcactaaattgagcagtgccattggaaaggtgatagaagctcaggttgacatgcca
atttttggagctactactttgtatttatcactacttacatttacacttcgtgtgcaccct
gatcggctggattatgtggatcaagtgctgggagcatgtgttaaaaagctttctgagctg
ccaaagcttgaagacagtagagctataaaacaaattgttgcacttctgagtgctccagta
gagagatacaataatgttgtgactgccttaacgctctcaaattatcctcgcgtcatggac
cgcctcgataatgaaactaacaaactcatggctatggttatcatccaaagcattatgaaa
aataatacttgtatttctagtgctgataaggttgaggtgttattcgaattgataaaaggg
ctcattaaggatttgaatggaactactgtagatgagcttgatgaggaggatttcaaagaa
gaacaaaattctgttgctcgccttatacacatgctttataatgatgatccagaggaaatg
ctgaagattatttgtactgtgagaaagcatgtaatggttggaggaccaaaacggttaccc
tttacagttcctcctctaatatttgcttcactcaggctgatcaggcaattgaatagtcag
gatggagaggtagtgggagaagaactgcctgcgacacctaagaaaatttttcaactcctg
aatcagacaattgaggctctttcatctgttccatcacctgagcttgctttaaggttgtat
ttgcaatgtgctgagactacacatccgcaggctgcaaatgactgtgatcttgagccagtg
gcttatgaatttttcactcaggcatttgtattatatgaagaagaaattgtggattccaaa
gcgcaagtgactgcaatacatctaattattggtactcttcagaggatgaacgtttttggt
gttgagaatagggataccttaacacacaaggccactggatattctgcaaaactcctgaag
aaacccgatcaatgcagagcagtttatgcatgttctcatctattttgggttgatgatcag
gacggaatcaaggatggagaaagggtcctgctatgcctaaagcgtgccttgagaattgca
aatgctgcccagcaaatggccaacgttacaagcggtagcaatggaccagttatactgttt
gttgaaatattgaacaagtacctgtacttctttgagaaagggaacccacaggtaactagt
gctgtaatccaggggttggtagaactaatcaatactgaaatgcaaagtgactcttcaact
ccagatcctgctgcaaaagctttctttgcatgcactcttaggtacattcaattccagaaa
caaaaaggcggtgctatggctgagaaatacgagcctatcaaggtttga
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