Jatropha curcas (Barbados nut): 105635574
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Entry
105635574 CDS
T03922
Name
(RefSeq) LOW QUALITY PROTEIN: cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105635574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105635574
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105635574
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
TIP49
AAA_22
AAA_14
AAA_2
RNA_helicase
IstB_IS21
AAA_18
nSTAND3
AAA_28
AAA_33
NPHP3_N
Vps4_C
Bac_DnaA
Mg_chelatase
Parvo_NS1
TsaE
Sigma54_activat
Rad17
NACHT
NB-ARC
ATPase_2
AAA_17
AAA_3
Viral_helicase1
AAA_11
Zeta_toxin
DUF815
AAA_7
Cytidylate_kin2
Nucleolin_bd
Motif
Other DBs
NCBI-GeneID:
105635574
NCBI-ProteinID:
XP_037496430
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MGAGSRRSQGRGGGGRNQRMLKHHIDSCKKKFSTSDDIAHHLRQNHSNYRRMELKTLIRL
VNQILHPSSPSPSSSCKRSSSLWQHEEEEEEEDEEGVSIYPSQSRKRRKRTDDSEKRLLQ
IENDHTKRIDQNQPTPSSLESESDSESLPSSSAVSTSEDGIYGEKVEPEFDLMQSMLRQS
YATESKEKEKGKEKEKEKEKNIEMEVASNSKTKNKVDIVNSCKGEEEASRLGADVRNEWK
GKGQLFDTDSVEVKGKDGPRFRDLGGMQSVLEELEMEVFLPLYHPHVLQRLGVNPIGGIL
LHGPPGCGKTKLAHAIAHETGVPFYKISATDVVSGVSGASEENIRDLFSKAYRTAPSIVF
IDEIDAIASKRENLQREMERRIVTQLMTCMDEFHRLLQPADANSDLESSDKKTGYVLVIG
ATNRPDAIDPALRRPGRFDREIRLGVPDENARGXILSVLLKMLLLKVSLVVLHKARLSPG
FVGADLHALVDKAGNLAMRRILAQRKSELTREYPNKECPEEWWKIPWLPEEIEKLAITMA
DFEQAAKMVQPSSRREGFSTIPNVKWEDVGGLESIRNEFDLHIVRRVKYPEDYQKFGVNL
ETGILLYGPPGCGKTLIAKAVANEAGANGANFIHIKGPELLNKYVGESELAVRTLFGRAR
TCAPCVLFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGADQRPGVFIIGATNRPEVMD
PAVLRPGRFGKLLYVPLPSSDDRGLILKALSKGKPIDPSVDLSAIGLMEACENLSGADLK
KLMDEAAMAALVEAKRNSCSDESPCTIKATHFEQALNKISPSVSHKQIQYYKVWSESFKT
T
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgggagctggaagtaggaggtcacaaggcagaggtggaggcggcaggaaccaaaggatg
cttaagcatcatatagactcttgcaagaaaaaattctcaacctcagatgatattgcccac
cacctccgccaaaaccactccaactaccggcgtatggagctcaagaccttgattagactc
gttaaccaaattctacatccttcatcaccatcgccatcatcatcatgcaaaaggtcttcc
tctctgtggcaacatgaagaagaggaagaggaggaggatgaggagggtgtttccatttat
cctagtcaatctcgtaaaagaaggaagcgaactgatgatagcgaaaagagattgctgcaa
atcgaaaatgatcataccaaaaggattgaccaaaatcagccgacaccctcctcattggaa
tcggagtcagactcagagtcattgccttcttcttcagctgtttcaacttcggaggatgga
atttatggagagaaagtggagccggagtttgatttgatgcaatcaatgttacgccagagt
tatgccaccgaatcaaaagagaaagagaaagggaaagagaaagaaaaagagaaggagaag
aatattgaaatggaggttgctagtaatagcaaaaccaaaaataaggttgacattgtaaat
tcatgcaaaggtgaagaagaagccagtagattgggggctgatgtgagaaatgagtggaaa
gggaagggacagttgtttgatactgatagtgtggaggttaaggggaaggatgggcctagg
ttcagggacttaggaggaatgcagtcagtgttggaggaattggagatggaggtgtttttg
cctctgtatcatcctcatgtgctgcagcggcttggagtcaacccgataggtgggatttta
ctccatgggccgccgggttgtggtaagaccaaattggctcatgcaattgcccatgagact
ggagttcccttttacaagatttcagctacagacgtcgtttctggggtttcaggtgcatcc
gaggaaaatatccgagacctgttctccaaagcatacaggactgctccatcaattgttttc
attgatgagattgatgcaattgcttcaaagagagaaaatctacagagggagatggagcga
aggattgtgacacaattgatgacatgcatggatgaatttcatagacttttacaaccagct
gatgcaaattcagacttagaaagttctgacaaaaaaactggctatgttcttgtaattgga
gctaccaataggcctgatgccattgaccctgcattaaggcggcctggaagatttgatcgt
gagattaggttaggcgtgccagatgagaatgctaggggttgaattctgtcagtcctacta
aaaatgttactcttgaaggtttctcttgtcgttttacataaagctaggttatcgccaggt
tttgttggagctgacttgcatgctttggttgacaaggctggtaatcttgccatgaggaga
atccttgcccagagaaagtctgagctaaccagagaatatccaaacaaggaatgtcctgaa
gaatggtggaaaataccttggttgcctgaggaaattgaaaagcttgccattacaatggct
gactttgagcaagcagctaagatggttcaaccctcttcaagaagagaaggattctctacc
attcctaatgtgaaatgggaagatgttggcgggcttgaatctataaggaatgagtttgac
cttcacatagttaggcgtgttaaatatcctgaggattatcagaaatttggagtgaattta
gagacaggaattttgctttatggccctccaggatgtggtaaaacactgattgcaaaggct
gttgctaatgaggctggagctaatggagctaatttcattcacatcaagggtcctgaactt
ctgaataaatatgttggagaaagtgaactggcagttcggacattgtttggtcgtgcaagg
acctgtgcgccatgtgttcttttctttgatgaggtggatgctttgacaacaaagcgcggg
aaagaagggggctgggtcgttgagcggctgttaaatcagttacttatagagttagatggt
gcagatcagcggccaggtgtttttatcattggtgccactaacagacctgaggtgatggac
cctgctgtcttacgacctggtaggtttggaaaacttctttatgtcccgctccccagttca
gacgatcgaggattgattttgaaggccctttcaaagggaaaacctattgatcccagtgtg
gatttgagcgccattggtctgatggaagcttgtgaaaatttaagcggggctgatcttaag
aagctgatggatgaagctgcgatggctgctctagttgaggcaaaaagaaatagctgctca
gatgagagcccatgcacaatcaaggcgactcattttgagcaagcactaaataaaatttct
ccatctgtctcgcacaagcaaatacaatattacaaggtttggtcagagagctttaaaacc
acatga
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