Jatropha curcas (Barbados nut): 105635803
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Entry
105635803 CDS
T03922
Name
(RefSeq) transcription elongation factor SPT4 homolog 2 isoform X1
KO
K15171
transcription elongation factor SPT4
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105635803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105635803
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105635803
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105635803
RNA polymerase I system
105635803
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
105635803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
105635803
NCBI-ProteinID:
XP_012074303
UniProt:
A0A067KM71
LinkDB
All DBs
Position
Unknown
AA seq
158 aa
AA seq
DB search
MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN
GIISVMDPSRSWAARWLRIGFKDSCGRTRLFFIPSLNTYKVRRCGGRISDWFNVLFWISD
SGRFVPGCYTLAVSEALPEDLQNLCEDERVQYIPPKRV
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcaccggcacaaattccgactagctttggtcatgagctgagggcttgtctt
cgttgccgcctcgtcaaaacctatgatcagtttagagagtctggatgcgagaattgcccc
ttctttaagatggatgaagatcatgagcgtgtggttgactgcactactcccaactttaat
gggataatttctgtcatggacccaagtagaagctgggctgctcgctggctgagaattgga
tttaaggattcttgtgggagaacaagattattttttataccgagtctgaatacctacaaa
gttaggagatgcggcggaaggatttcagattggtttaatgttctattttggatttctgat
tcaggaagatttgttcctggttgctacactcttgctgtctcagaggcactgccagaggac
ttgcagaatttatgtgaagatgaacgtgtacaatacattccaccaaaacgtgtatga
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integrated database retrieval system
