Jatropha curcas (Barbados nut): 105635903
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Entry
105635903 CDS
T03922
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105635903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105635903
03036 Chromosome and associated proteins [BR:
jcu03036
]
105635903
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105635903
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105635903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5311
Nup160
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
105635903
NCBI-ProteinID:
XP_012074439
LinkDB
All DBs
Position
Unknown
AA seq
1501 aa
AA seq
DB search
MARRSTLAGMEVPITGSDSIKWVELSVADSETVTVSATPPPVAPLTEDCASCSVIGDPPL
YVIWRINKNRPRALELLELSANKEFPKIGLRITLPDSLCPFAYICKNEIGRPATPYLLYL
LTVSGVAYVFKLRNVSGYTSCSTFPPSEVIEFNLRSYFDNVTITSVAATAGCLVVGRNDG
SVACFQLGSADQTAPGFAYELRDDLGMSRLWGFMSRGKVLGAVENLVIQELHGLKLLFVL
HSDGILRIWDLSNRVKILNHTMSIPNSEGAKFVRLWVGEVIENSTLIPLAILYRYNEEVS
MEMVCVYGLHCSFGDRITLLVETSMQNIPLEEGECVDIKLHSDKIWILKDTGLIFHTFSH
NTDNYAEEAHCYALQEEFVAEQLFQTSEHSSNDLILIIHSIFSYTKDHVVPFLSSIFLRR
LLQPGVHHNAVLRATFLDYNKHWTDTEFNSLTVGGLKKEICSLIEQEGVNEGPVSVFWSW
KNFCTRYFQNWCKHNSPCGFLVQSCTGAIGLVRRNSIALFRDMEKFEVLIDGSDELVDTI
SFRLDMSDDDSEHQILMEVLRCIISMSQQLGKTASAIFYESLVGRSTISSEEIVPRLLKI
LETGYSSSVSSLNVSGDFALEKELIDHRNLRKFSIDMLFSLHALSKKADSWCKILNVIES
YLQFLVPQKVMQKQDAGMPFDINVSVLVQATSQIAKSMFDSALDILLFVSYLLNISGQIN
MSPDDISRIQLELVPMIQEIVFEWLIIHFLCTTPSESPAIEDFSSQLSLLQIDGSTDKRS
WNEKLGKCNFTLAFILLLSIQISHGDPNRPSRYLPNPQEILCSVRDFTSWIIWGKSGEES
NSFLKRSTELALILLRHSQYDAVEYLLTIIEANSRKEKIFRSIQDTDGDWCLLQHLLGCC
LLAQARYGFHGILKEKKVCEAVRCFFRASSGQGASQALQDLSHDAGLPYLGFNDCASSAA
WKLHYYQWSMQIFEQYGISEGAYQFALAALEQVDEALSQKDDSCRRDTLNESATAIKGRL
WANVFKFALDLNHLHDAYCAILSNPDEDSKYICLRRFIIVLHERGGMKVLCGGQIPFIGL
AEKIEQELAWKAERSDILTKPNPYKLLYAFEMHRHNWRRAASYIYQYSTRLRAEIVMKDH
QHISLVLQERLNGLSAAINALSLVHPAYAWIDHLLEGNSLHNECYPSKKAKKTVKEQLVG
SDVEPQRLQFYVDTEKLENEFVLTSAEYLLSLANVKWKSTETDNAPSDLVDLLVQTNLYD
MAFTVLLKFWKGSALKKELEKIFSSMSLKCCPNKVGSSSAGNDMRSHGLLLTSSMDDMVV
HGSPDVGPASQQSRGNMQWETLELYLEKYKAFHAGLPVTVAETLLRSDPQIELPLWLVHM
FKDFRRDRTWGMTGQESNPASLLRLYVDYGRFTEATNLLLEYLELFASVRPSDLVHRKRP
FAAWFPYTTMERLWCQLDELINLGHMVDQCEKLKKLLHGALLNHLKLLKVDSDDAISSAA
C
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaggtcgacgttggccgggatggaagtccctataaccggcagcgattccatc
aagtgggttgaactctccgtcgccgatagtgagacagtcaccgtgtccgcaactcctccg
cctgtggcccctctcactgaagattgtgcctcctgctccgtgatcggagatccccctctc
tatgttatttggaggattaacaagaatcggcctagagctcttgagttacttgagctctct
gctaataaagaatttcccaaaattggacttcgaatcaccctccctgattctctttgtcct
ttcgcttatatctgcaaaaacgagattggtcgtcctgcaacaccctacttgctctattta
ttgactgtctctggagttgcttacgttttcaagctcagaaatgtttctggttacacttcc
tgctccacatttccaccaagcgaggttatagagtttaatttgcggagttattttgataat
gtaacaataactagtgtagcagctactgctggatgccttgtggttggtagaaatgatgga
tctgttgcttgcttccaacttggctcagctgatcaaactgctcctggttttgcgtatgag
ctgcgggatgatttgggcatgagtcgtttgtggggttttatgtcaaggggtaaggtgttg
ggagctgtagagaatttggtaatacaggagctgcatggccttaaacttttatttgtgctt
cattctgatgggatactgcgaatatgggatctgtcaaatcgtgtcaagatcttaaatcac
accatgagcattccaaattcagaaggtgcaaaatttgtgaggttgtgggtgggtgaagtt
attgaaaattcaaccttaattcccctggccatcttgtatagatataatgaggaagttagc
atggagatggtctgcgtttatgggcttcattgtagttttggggacaggatcactttgtta
gtagagacttcaatgcaaaatattccgctggaggagggggaatgtgttgatatcaagctt
cattcagataaaatatggatattgaaagacactggattaatttttcatactttttctcat
aatacagataactatgcggaagaggcccactgctatgctttgcaggaagaatttgttgct
gaacaactatttcaaacttctgaacattcttccaatgatcttattttgattatccattct
atattctcatatacaaaggatcatgttgtgccatttctttcttctatctttttacgtagg
ctgcttcaacctggggttcatcataatgccgttctgcgagcaacttttcttgattacaac
aaacactggactgacactgaattcaattccttaacagttggtggactgaagaaagaaatt
tgttcactgattgaacaggagggtgtcaatgaaggtccggtatcagtgttttggtcctgg
aaaaatttctgtacacgctatttccagaattggtgcaagcacaattcgccttgtggtttt
ctagtccagtcctgcacaggtgctattggtttagtaagaaggaattcaatagctttattt
cgtgatatggaaaaatttgaggtgcttattgatggttctgatgaactagttgatacaatc
agcttcagattggacatgtctgatgatgattctgagcatcagattcttatggaggttctc
agatgtattatcagtatgagccaacaattggggaaaacagcttctgctatattttatgaa
tcacttgttggcagatcaactatttcatctgaagaaattgttcctcgcttactgaagatt
ctggaaactggatacagttcatcagtgtcatctcttaatgtatcaggcgattttgctttg
gagaaggaactgattgatcacagaaatctgaggaaattctcgattgatatgctattttct
cttcatgctttgtccaaaaaggctgattcttggtgcaaaattttgaatgtcattgaaagc
tatcttcaatttcttgtacctcagaaggtcatgcaaaaacaagatgctggaatgccattt
gatataaatgtttctgttttagtccaagctacttctcaaattgcaaagtcgatgtttgat
tctgcattggatattctcctatttgttagctatcttctcaacatcagtggacagataaat
atgtcgcctgatgacatatccagaatacaacttgaactggttccaatgattcaagagatt
gtttttgagtggctgattattcattttctttgcacaacaccgtctgaatctcctgcgatc
gaagatttcagttctcaactctcattattgcaaattgatggcagcaccgataaaagatca
tggaatgagaaactaggcaaatgcaattttacattggcttttatacttttgctaagtatt
caaatttctcatggagacccaaatcgcccttcaagatatctcccaaatccgcaagaaatc
ctttgttcagtgcgcgactttacaagctggattatttggggaaaatctggggaagaatct
aattctttcttaaaacgttcaactgagcttgcactgatccttcttaggcatagccagtat
gatgctgttgagtaccttctaactattatagaggccaattcacgaaaagagaaaatattt
agaagtattcaagatactgatggtgattggtgtttacttcaacatctgttaggatgttgc
ctccttgcccaggcacgatatgggttccatggaattttgaaagaaaagaaagtttgtgaa
gctgttcgctgttttttcagggcttcatctgggcaaggagcttctcaagctttgcaggat
ttatctcatgatgctggattgccatatcttggttttaatgattgtgcgtcatcagctgca
tggaagcttcattactatcaatggtcaatgcagatttttgagcaatatggcattagcgaa
ggggcttatcagtttgcgctagctgctcttgagcaagtagatgaagctcttagtcagaaa
gatgattcctgcaggagagatacactcaatgaatcggccactgccatcaaaggacgactc
tgggcaaatgtcttcaagtttgctttagatcttaatcacttgcatgatgcatactgtgca
atactttctaatccagatgaggacagcaagtacatctgcttgaggcgtttcataatagtt
cttcatgagcgtggaggaatgaaggtgctttgtggcggtcaaatacccttcataggatta
gcagaaaagatagagcaagagcttgcctggaaggcagagcgttcagatattttgacaaag
ccaaacccatataagttgctctatgcatttgaaatgcatcggcataactggcgaagggca
gcgagttacatataccaatattcaacccgtttgagagcagaaatagttatgaaagatcac
caacacatatcgctggtgctccaagagaggctgaatgggctttctgctgctatcaatgct
ctgagtcttgttcatcctgcatatgcctggattgatcatctccttgagggaaattctctt
cataatgagtgttatcccagtaaaaaagccaaaaagacagtcaaagaacagttagttggc
agtgatgttgaacctcaaaggctgcagttttatgttgatactgagaaacttgaaaatgag
tttgtgctaacttcagcggaatacttgctgtcattagcaaatgtcaaatggaaatccact
gaaacagacaatgctccatcggatttggttgatcttttggttcagaccaatttatatgat
atggcatttacagttcttttgaaattctggaagggttctgcattgaagaaggaattggaa
aaaattttctcttctatgtcattgaaatgctgtccaaataaagtgggttcatcatctgcc
ggaaatgatatgaggtcgcatggtcttttattgacatcctcaatggatgatatggttgtt
catggttcacctgatgtgggtcctgcatctcagcagtctagagggaatatgcaatgggaa
actcttgagctctatcttgaaaaatataaagcatttcatgctggattaccagtaactgtt
gctgaaacacttcttcgttcagatcctcagattgaattacctttgtggctggtacatatg
ttcaaggattttcgaagggataggacctggggaatgactggccaagaatcaaatcctgca
tctttgctccgactatatgttgattatgggcgatttacggaagctactaatttgttgctt
gagtatttggaattatttgcatcagtgagaccatctgatctggtacatcggaaaaggcca
tttgcagcatggttcccctacacaacaatggagcgtctatggtgccaactcgatgagttg
atcaatttaggccatatggtcgatcaatgtgagaagcttaaaaagctattgcatggagct
ttgctgaaccatctgaagctgctaaaggtggactccgatgatgcgatatcttctgctgcc
tgttaa
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