Jatropha curcas (Barbados nut): 105635949 Help Entry 105635949         CDS       T03922                                  Name (RefSeq) protein CHROMATIN REMODELING 5   KO K11367   chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] Organism jcu  Jatropha curcas (Barbados nut) Brite KEGG Orthology (KO) [BR:jcu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:jcu03021]     105635949    03036 Chromosome and associated proteins [BR:jcu03036]     105635949 Transcription machinery [BR:jcu03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      105635949 Chromosome and associated proteins [BR:jcu03036]  Eukaryotic type   Histone modification proteins    HAT complexes     SAGA complex      105635949     SLIK complex      105635949 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HTH_CHD1_Hrp3 Chromo CHD1-like_C HDA2-3 ResIII DEAD Chromo_MIT1 Motif Other DBs NCBI-GeneID:  105635949 NCBI-ProteinID:  XP_012074478 LinkDB All DBs Position Unknown AA seq 1761 aa AA seqDB search MAFFRNYSNQTVSQSASEEKGQGQGIDRMVGSDDVDVTSSEREFDMNMDAQYESEGEDPG RMQSDVAADNGVGVSNSHLQPSARRNAAGKWGSTFWKDCQPMGAQVASDSGHDSKSEFKN AEGSEDNISDGGDDRLESEDEEGQKEVGKGQRGHSDVPADEMLSDEYYEQDGEDQSDSVH YRGFNNSAGLNSRAHLKPAPANNSFSRRSRALHNDDNDEENDDGDADYEEEDEEDEDDPD DADFDPDYGVASGQGGIKDKNWDGEDSDSDDISNDEIDVSDEDDSYYTKKPKGRQSGKGG RNTKPAKEHKSLHSSGRQKRGKTSFEEDEYSSEDFDSESDEDFKSMTKRGSHIRKSNARS TMSTAISGRNSEIRTSSRSVRKVSYVESDESEEVDEGKKKKSQKEEIEEEDGDSIERVLW HQPKGMAENALRNNQSTEPVLLSHLFDSEPDWNEMEFLIKWKGQSHLHCQWKSFAELQNL SGFKKVLNYTKKVNEDARYRRMLTREEIEVNDVSKEMDLDLIKQNSQVERIIADRISKDS SANIVPEYLVKWQGLSYAEATWEKDIDIGFAQDAIDEYKAREAAMAVQGKMVDLQRKKGK ASLRKLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFL QNAQQIPGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKVG RPIKFNALLTTYEVVLKDKVVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNKLLI TGTPLQNSVEELWALLHFLDPDKFRNKDDFVQNYKNLSSFNEMELANLHMELRPHILRRV IKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFQDLNKGVRGNQVSLLNIVVELKKC CNHPFLFESADHGYGGDSGINDNSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMV RMLDILAEYMSIRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLA TADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDH LVIQKLNAEGRLEKKETKKGSYFDKNELSAILRFGAEELFKEDRNEEESKKRLLSMDIDE ILERAEKVEEKEAVGEEGHELLSAFKVANFCGAEDDGSFWSRWIKPEAVAQAEEALAPRA ARNNKSYVEANQYERSNKRKKRSSEAVEIHERVQKRRKADYSAPSVPMIEGASAQVREWS QGNLSKRDALRFSRAVMKFGNASQIELIVSEVGGSVAAAPLDAQIELFDALIDGCKEAVD TGNVDPKGPLLDFFGVPVKANDVVNRVQELQLLAKRISRYEDPIAQFRVLMYLKPSNWSK GCGWNQIDDARLLLGIHYHGFGNWEKIRLDERLGLSKKIAPAELQHHETFLPRAPNLRDR ANALLEMEITAVGGKNANAKGGRKASKKQKDNVLNVPVSRSRVKKGKPGPAIVGFQNSRN RPQKPQKAEQLAKEEGEMSDNEELCEQFKEVKWMEWCEEVMVDQIKTLRRLQRLQTTSAD LPKEKVLSKIRNYLQLLGRRIDQIVVEYEEELYRQDRMTTRLWNYVSTFSNLSGERLHQI YSKLKQEQDDESGVGPSHINGSASGPIDSDSNYFPTSRHVERQRGYKNMNSYQMQESIQK GHDNGKFEAWKRRRRAEADTHSQSQPPLQRPISNGVRVTDPNSLGILGAAPTDNRRFSSE RPLRMRQTGFPARQNFSSGIK NT seq 5286 nt NT seq  +upstreamnt  +downstreamnt atggctttttttagaaactattcaaaccaaacagtttcacagagtgcatcggaagaaaaa ggccaggggcagggaattgatagaatggtgggaagtgatgatgtagatgtgacttcaagt gaacgagaatttgacatgaatatggatgcacaatatgagagtgaaggggaagatcctggt aggatgcagagtgatgtagctgctgacaatggagttggtgttagtaattcacatttgcag ccttctgcaaggagaaatgctgcaggaaaatggggttcaactttttggaaagattgccaa cctatgggtgctcaagtagcatctgattctgggcatgattcaaaatcagaatttaaaaat gcagaagggtcagaagataatatatcggatggaggggatgacagattagaatctgaagat gaagagggacaaaaagaagttggtaagggacaaaggggccattcagatgtccctgcagat gaaatgttgtcagatgaatactatgagcaggatggggaagatcaaagtgattcagtgcat tacagaggatttaacaattctgctgggttgaattctagggcgcacttgaaacctgcacct gctaacaacagtttctccaggcgttccagagctttacacaacgatgacaatgacgaagaa aatgatgatggtgatgctgattatgaagaagaggatgaggaagatgaagatgatcctgat gatgctgactttgaccctgattatggtgttgccagtggccagggcgggatcaaggataaa aactgggatggtgaagattcagattcagatgatattagcaatgacgagattgatgtctca gatgaagatgattcttactacacaaagaagcccaagggtaggcaaagtgggaaaggtgga cgaaatacaaaacctgctaaagaacacaaatctttacattcttcaggtcgacaaaaaaga gggaaaacatcttttgaagaggatgagtattcatctgaggactttgacagtgaaagtgat gaggattttaagagcatgaccaaacgaggatcacatatccgcaaatctaatgctcgttcc acaatgtcaacagctattagtggaagaaacagcgagatccgcacatctagtaggtcagtt cgaaaggtatcatatgttgaaagtgatgaaagtgaagaagttgatgaaggaaaaaagaaa aagtctcagaaggaagaaattgaagaagaagatggtgattccattgaaagagtgctgtgg catcagccaaaaggcatggcagagaatgctttaaggaataatcaatcaacagagcccgtt ctgttaagtcacttgtttgattctgaaccagattggaatgaaatggagttcttaatcaaa tggaagggccagtcacacttacactgccagtggaaatcttttgcagaactacaaaatctg agtggttttaagaaagtattgaactatacaaaaaaagtgaatgaagatgcgagatatcgg agaatgcttactcgtgaagagattgaggtcaatgatgtgagtaaagaaatggatttggat ctaatcaagcaaaacagtcaggtggagagaattattgctgatagaatcagtaaagatagc tctgctaacattgtgccagagtatttagtcaagtggcaggggctctcttatgctgaagca acctgggaaaaggatatagatattggatttgcacaagatgcaattgatgaatacaaggca cgagaagctgcaatggctgtacaagggaaaatggtagatctccagcgtaagaagggcaaa gcaagtttaaggaagcttgatgaacagcctgaatggttgagaggaggaaagcttcgtgat tatcagttagagggcctgaattttcttgttaatagttggagaaatgatacaaatgtaatt ttagctgatgagatgggtcttggcaaaactgttcagtctgtctccatgcttggttttcta cagaatgcacaacaaattcctgggccatttcttgtcgttgtaccgttatccactttgtct aactgggctaaagaatttaggaagtggcttcctgatatgaacattatcgtgtatgttggt acccgtgctagccgagaggtctgtcagcaatatgaattttataatgataagaaagttggg cggcctataaaatttaatgcactattgactacatatgaagttgttctgaaggacaaggta gtcctgtccaaaatcaagtggaattatctgatggttgatgaagctcataggttaaaaaac agtgaggcacaactgtacacaactcttttggaatttagcacgaagaataagttgttaatt actggaactccattacagaacagtgtagaagagctgtgggctctgcttcacttccttgat cctgataaattcaggaacaaggatgattttgttcaaaattacaagaaccttagctcattc aacgagatggagcttgccaatctgcatatggaattgaggcctcacatcctcagaagggtc attaaggatgtagaaaaatccttgcctccaaagattgagcgtattctgagggttgaaatg tccccactccagaaacagtactacaaatggattttggaacgcaactttcaggacctgaac aaaggagttcgtggtaaccaggtttcgcttctaaatattgtagtagagttgaagaaatgc tgcaatcatcctttcctatttgaaagtgctgatcatggttatggtggggactctggcatt aatgataacagcaaattggagagaattatcttgagcagtggaaagttggttatacttgac aagttactggtcaggttgcatgagacaaaacatcgtgttctgattttttcccagatggtg agaatgttggatatactagcagaatatatgtcgattagaggttttcaatttcaaaggctt gatggtagtacaaaggctgagttgcgacagcaggctatggatcatttcaatgcacctgga agtgatgatttctgcttccttctttcaactagggctggtgggctaggcatcaatcttgct acagctgacacagttataatatttgattcagattggaatccccaaaatgatttacaggca atgagcagagctcataggattgggcagcaagaagtcgttaacatatatagatttgtcact agcaagagtgttgaggaagatatcctggaacgagctaagaaaaagatggttcttgaccat ttggtgatccaaaaattaaatgcagagggtagattggaaaagaaagaaaccaaaaaaggg agttattttgacaagaatgagctatctgcaattttaaggtttggtgcggaggagcttttt aaagaggacagaaatgaagaagaaagcaagaagagattattaagtatggatattgatgaa attcttgaaagagcagagaaggtagaagagaaggaagctgtaggagaggaaggacatgaa ttattgagtgctttcaaggttgcgaacttctgtggcgctgaggatgatgggagtttctgg agtcgttggataaaacccgaagcagtagcccaagctgaggaagcattggctcctcgtgct gcaagaaacaataagagttatgtggaggctaaccaatatgagagaagtaataaaagaaaa aagagaagttccgaagctgtggaaatacatgagcgagtgcagaaacgtcgcaaagcagat tattctgccccttctgtcccaatgattgaaggtgcatctgcccaagttagagaatggtct caggggaatttgtccaaaagagatgctttacgtttttctcgagcggtaatgaaatttggg aatgcaagccaaatagagttaatagtttctgaagtcggtggatcagtggcagcagctcca cttgatgcacagattgagctttttgatgctctgatagatggttgcaaagaagcagttgat acaggaaatgtggaccctaagggtcctttattggacttctttggtgtccctgtgaaggcc aatgatgtagtcaaccgtgttcaagaacttcagctgctagcaaagcgaattagtcgttac gaagaccccatcgcacaatttcgagttttgatgtatctcaaaccttcaaactggtctaag ggctgtggctggaaccaaattgatgatgcaagattgcttttgggaatacattatcatgga tttggcaattgggaaaagataagattagatgaaaggcttggcctctccaaaaagattgct ccagcggaactacaacaccatgagaccttcttaccgcgtgctcctaatttgagggaccgt gctaatgcgctcctggaaatggaaattactgctgttggtggaaagaatgcaaatgctaaa gggggtcgtaaggcatccaagaagcaaaaagataatgttctcaatgttccagtatctcgc agcagggtcaagaaaggaaaacctggtcctgcaattgtcggtttccaaaacagcaggaat cgacctcagaaacctcagaaagctgaacagttggcgaaagaggagggtgaaatgtcagac aatgaggaactgtgtgaacaatttaaagaagtgaaatggatggaatggtgtgaagaagtt atggttgaccaaattaaaacccttagacgtcttcaaaggctgcagactaccagcgcagac ctaccgaaggaaaaggtgctttctaaaattcggaattacttgcagcttcttgggcggagg atagaccaaattgtggtagaatacgaggaagagctttatagacaagataggatgactacg cgattgtggaactatgtctctactttttcaaatttatctggggagagacttcatcagatc tattctaaacttaagcaggagcaggacgatgagtcaggggttgggccgtcccacatcaat ggctctgcatctggtccaattgatagtgattccaactattttcctacttcacgccatgtt gagaggcaaagaggttataaaaatatgaattcatatcaaatgcaagaatcaattcaaaaa ggtcatgataatgggaaatttgaagcgtggaaacgacgtagaagagctgaagctgataca cattcacaaagtcaaccccctttgcaaagaccaataagtaatggtgtccgtgtaactgat cctaactcattggggattcttggggctgcaccaactgataataggcgatttagtagtgag aggcctttgcggatgcggcaaactggttttcctgcaagacagaatttctcatcaggtata aaatag

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