Jatropha curcas (Barbados nut): 105636207
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Entry
105636207 CDS
T03922
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jcu03036
]
105636207
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
105636207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
Motif
Other DBs
NCBI-GeneID:
105636207
NCBI-ProteinID:
XP_012074803
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MALKLEQQLKELGSKLETPPPTKDTLVKLLKQAATCLSEMDQSPSAITMESMQPFLDAIV
KPELLKHQDRDVKLLVAACICEITRITAPEAPYSDDVLKDVFHLIVGTFSGLSDTGGPSF
GRRVVILETLAKYRSCIVMLDLECDDLVNKMFSTFFTVASDDHQESVLSSMQTIMAVLLE
ESEDVKEDLLLVILSVLGRNRSDISSAARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDNR
SANSQIDYHEVIYDVYRCAPQILSGVIPYLTGELLTDQLDIRLKAVGIVGDLFALPGSTI
SEPFQPIFSEFLKRLADRGVEVRMTVLERVKSCLLSNPLRPEASQMITALCDRLLDYDEN
VRKQVVGVICDVACHALNSMPVDTIKLVVERLRDKSLLVKRYTMERLAEIFRVYCVKSSD
ASVSATEFDWIPGKILRCFYDRDFRSDTIESVLCGSMFPTEFSVKDRVKLWVRVFSVFDK
VEVKALEKMLEQKARLQQEMQRYLSLRQMHQDGDAPEVQKKVLFCFRIMSRSFAETTKAE
ENFQILDQLKDANIWKILINLLDANTGFHQACICREDLLKILGEKHRLYDFLSNLSLKSS
YLLFNKEHVKEILLEAATHKSAGNMQFTQSCMDILVLLARFSPMLFGGAEEELLKFLKDD
NEIIKEGALHILAKAGGTIREQLAVSSSSIDLILERLCLEGSRRQAKYAVHALAAITKDD
GLKSLSVLYKKLVDMLEEKRDLPAVLQSLGCIAETAMPVFETRESEIEEFIKSKILKCSS
KAEENAKACWDDRSELCLLKIYGIKTLVKSYLPVKDVQLRPGIDGLLETLRNVLLFGEIS
KDIESSSVDKAHLRLASAKAVLRLSKHWDHKIPVDVFHLTLRTPEIAFPEARKLFLSKVH
QYIKDRLLDVKYACAFFFNTSGSNPLDSEEEKQNLADIIQMYYQAKARQLSVQSDANPSG
AYPEDILPYLVHVLAHHSCPNVDECKDVKAFETIYRQLHLILSVLVHKDEDAKSEPSTNK
EKENLKERENLSAIVSIFQSIRCSEDIIDATKSKNSHAISELGLSITKRLAQREDDLQRS
ASSVSLPPILYKPYEKKEGDELATEGKTWLADVHVLTQLESLKLESDGKINSGIPEDEVL
KDAEKEANEVPLGKIIKQLKLQGTKDGKVKKKSLSAKKKNAESDVDILKMVREINLDNLG
ALSSKFESSNGHKHFPSETKSEPGHQIAKKRKVTDVASVPVPKRRRSASHSAFRLSSSNL
FNPLSASGDDSSPDAKDKKYVRRSTESDLLVSCVRKNISFSSKHKGKSSDFGDNSKENED
NDDYNLKKSIESGDTDNIDGSNNFKSLTGSMKKRKRRSIAGLGKCTTKKSGIDMEEVIGC
RIKVWWPMDKQFYEGTIKSYDPIKRKHVILYDDGDVEVLRLEKERWELVDSGRKTIKKAN
LLKHTLSTKLSPAQKRKSVGNSHQKKRSENIVKGKRTPKKNSKRIHKEPEDKDDSDVSNP
EPSEESRGDEAKPGDSDGEHAEGVTQNPTDMDESDKEVTSISGEKHLEDTLENQNHSEES
DGEEKSNLEVKDFADTESIPEDAKKDAAEEPHSEEREDELSEGLKEESNKDKSDSEGDQD
EDAIGTGQKSLEKLDAESSPSNAGDAEFSDNEPLSKWKNKVRKSASRQAR
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atggcactaaagcttgaacagcagctcaaggagttgggatcgaagctggagacccctcct
cctactaaagacactcttgttaagctcttaaagcaagcagctacatgtctttctgagatg
gatcaatcaccatcagctataacaatggagtcaatgcagccgtttcttgatgcaattgtt
aagccagaattgctaaagcatcaagatagagatgttaagcttctagttgcagcctgtatt
tgtgagataactcggattactgcccctgaagctccttatagtgatgatgttttaaaggat
gtttttcacttgattgtaggcacttttagtgggttaagtgatactggtggtccgtcattt
ggaagaagagttgttattttggagacccttgccaaatataggtcgtgtattgtgatgttg
gatctggaatgtgatgatcttgtgaataaaatgttcagtacattttttaccgttgccagt
gatgatcatcaagaaagtgtattgtcatccatgcaaacaataatggctgtccttctagaa
gaaagtgaggatgtcaaagaggatctcttacttgtcatattatctgtattaggtcgaaat
agaagtgatatttcttcagctgcaaggagacttgctatgaatgtaatagagcagtgtgct
ggaaaacttgaagctggaataaaacagttccttgtatcatcaatgtcaggagataacagg
tctgcaaatagtcagattgactatcatgaagttatatatgatgtttaccgttgtgctcct
cagatcttgtcaggagtcattccttaccttacaggggaactattgactgatcaactcgac
attcgtttaaaagcagtggggatagttggagatctttttgctctgccaggctctaccatc
agtgaaccctttcagccaatcttttcagagtttttgaaaaggttggctgatagaggagta
gaggtcagaatgactgtcctggaacgtgtcaaaagctgtctgctgtcaaatcctttgaga
cctgaggcttctcaaatgatcactgctctctgtgatcgactattggactatgatgagaat
gtccgaaaacaagttgttggtgtcatttgtgatgtggcatgccatgcgctgaattccatg
cctgttgatactataaaactagttgtggaacgtcttcgagacaaatctctacttgttaaa
aggtataccatggagagactggctgagattttcagggtttattgtgtgaagtcctctgat
gcctcagtcagtgccactgaattcgattggattcctggaaagattttgaggtgtttttat
gacagagatttcagatcagatacaattgaatctgttctttgtgggtccatgttcccaact
gagttctcagtgaaagatagagttaaactctgggtcagagtgttctctgtatttgacaaa
gtggaggttaaagctcttgagaagatgctggagcagaaggcacggttacaacaagagatg
cagaggtatctatccctcagacagatgcatcaggatggagatgctccagaggtccaaaaa
aaagttctgttctgttttaggatcatgtctcggtcatttgccgaaaccactaaggctgag
gagaattttcagatacttgaccaattgaaagatgccaatatctggaagattttaataaac
ctgcttgatgcaaacactggtttccatcaagcttgtatttgtcgggaggatttgcttaaa
atacttggtgaaaaacatcggctgtatgattttctgagtaatctctcgttgaagagttct
tatttacttttcaataaagagcatgtaaaagaaattcttttggaggctgccacccataag
tctgctggaaatatgcaatttactcaatcctgcatggatatactggtgcttcttgcacgc
ttcagtccaatgctatttggtggggctgaagaagaattactcaagtttttgaaagatgat
aatgagataataaaagaaggtgctttgcacattttggcaaaggctggtggtaccatcaga
gaacagcttgcggtgtcgtcaagttcaattgaccttatattggagcgtctctgcttagaa
gggagtcgaagacaggccaagtatgctgtgcatgccctagcagcaataacaaaagatgat
ggactcaagtccctatctgttttatacaagaaacttgttgacatgctggaggaaaagaga
gatttgcccgctgtactgcaatctctgggatgcatagcagaaactgcaatgccagttttt
gagaccagagagagtgaaattgaagaattcataaaaagcaagattcttaaatgtagcagt
aaagcagaagagaatgcaaaagcatgctgggatgacagaagtgaactttgtttgttgaag
atatatggtatcaagacactggtcaagagctacttgcctgtcaaagatgtgcaacttcgc
cctggcattgatggccttctggagacccttaggaatgtacttctttttggagaaatatca
aaagatattgaatcaagttcagttgacaaggctcatttgaggcttgcttctgcaaaagcg
gttcttcgtttgtcaaagcactgggatcataagatacctgttgatgtcttccacttaacc
ttaaggacacctgagattgctttcccagaagctagaaaacttttccttagcaaagttcat
caatacattaaggatcggcttctggatgtgaagtatgcttgtgctttcttttttaataca
tctggatctaatccccttgattctgaagaggagaagcagaatctagctgatatcattcaa
atgtattaccaagcaaaggcaagacaactctctgtacaaagtgatgcaaatccctcagga
gcatatcctgaagacattcttccttatttggtccatgtccttgctcatcattcatgtcct
aatgtagatgaatgcaaggatgttaaagcatttgaaacaatataccggcaattgcacttg
attctttctgttctggtgcataaagatgaagatgccaagtcagaacctagcacaaacaaa
gagaaagagaatttaaaagagagagagaatttatctgcaatagtttctatctttcaaagt
atcaggtgttcagaagatataattgatgctacaaagtcaaagaattcacatgctatctct
gaacttgggctgtcaatcaccaagcgcttagctcaaagggaggatgatttacaaaggtcg
gcttcatcagtttccctgcctccaatactttacaaaccgtatgagaagaaagaaggggac
gagctggcaactgaaggaaaaacatggttagctgatgtgcatgtcttgactcaacttgaa
tcacttaagctagaaagtgatggaaagattaattcaggtattcctgaggatgaagttcta
aaggatgctgaaaaagaagcaaatgaggtgcctcttgggaaaataataaaacagttaaaa
ttgcagggcaccaaggatggcaaagttaaaaagaagtctttatcagctaaaaagaaaaat
gctgaaagtgatgttgatatcctgaagatggtcagggaaatcaatttggataatttgggg
gccttatctagtaagtttgagtcaagcaatggtcacaaacattttccaagtgaaacaaag
tcggaaccagggcaccaaatagctaaaaagagaaaggttactgatgtagcatctgttcca
gtacctaaacgacggagatcagcttctcatagtgctttcagactatcttcgagcaattta
tttaatccgcttagtgcttcaggggatgattccagccctgatgcaaaggataaaaagtat
gtccgaaggagcaccgagtctgacttgttggtatcatgtgtgcgaaagaatataagcttc
tcgtcaaaacataaaggcaaaagctctgattttggtgataatagtaaggaaaatgaggat
aatgatgattataatctgaagaagtctattgagtcaggagacactgataacattgatgga
agtaataacttcaaatctttgactggaagcatgaagaagagaaaaagaagaagcatcgca
gggttgggaaagtgcacaacaaagaaaagtggcattgatatggaagaggtaattggttgt
agaataaaagtttggtggcccatggacaagcaattttatgaaggcaccatcaagtcgtat
gatcctataaaaaggaaacatgtgatattatatgatgatggagatgtagaagtgctccgt
ctagaaaaagagcgctgggagcttgtggacagcggtcgcaaaactattaagaaggcaaac
ttattgaagcataccctgtcaactaaactctcgcctgcacagaaaagaaaaagtgtgggt
aattcacatcaaaagaagagatcagaaaatatagttaaaggcaaaagaactcccaagaaa
aattccaagcgcatacataaagaacctgaggacaaggacgactctgatgtatcaaatcct
gaaccctctgaggaatctagaggagatgaagcaaaaccaggtgattctgatggggaacat
gctgaaggggtgacacaaaacccaacagatatggatgaatctgacaaggaagtgacatca
atttctggagaaaaacacttggaggacacactggagaaccaaaatcattccgaggaatct
gatggagaagaaaaatccaatttggaagttaaagattttgcggatactgagagtatacca
gaagatgctaaaaaagatgcggcagaagaaccccattcagaggaacgagaagatgaatta
agtgaaggcctaaaagaggaatctaataaagacaaatcggactctgaaggggatcaagat
gaagatgcaattgggactggtcagaaaagtctggagaaactagatgcagaatcgagtcct
tccaatgctggggatgctgaattctctgacaatgagcctcttagcaaatggaagaataaa
gtacgaaaatcagcatcaagacaagcaagatga
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integrated database retrieval system
