Jatropha curcas (Barbados nut): 105636240
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Entry
105636240 CDS
T03922
Name
(RefSeq) probable pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105636240
Enzymes [BR:
jcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105636240
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105636240
NCBI-ProteinID:
XP_012074853
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All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MGNSHGHRKFHNGARPSGSFPDITATAPPPYFNYGPAPDHTPQIPTSVLPPAQNQIPPPN
MATTSLPYVHVDSTLRALAGQAEGFGRHAIGGLHGHLYQVTTLADDGPGSLRDGCRRNEP
LWIVFEVSGTIHLHSYLSVSSYKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGP
DIDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFAQHDKTMLIGADPSH
ISDRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIY
EAGQKKVAFKYLTEKAADKEEAGTGYIRSEGDLFVTGTQAGLMLQTAESCMFHPSQYYPN
WTVEAPTDALKQVLQHCTGWQHVPRPVDQNQILPAQC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgggaaactctcacggccatcgcaaattccataacggcgcgaggcccagcggcagtttc
cccgatataacggcaactgctccgcctccatactttaattatggacctgcgccagatcac
actcctcaaattccgacctcagtgctgcctcctgcacagaaccagattccgccgcctaac
atggcaacaacctctttgccttatgttcacgtcgactccaccttgcgagcccttgccggc
caagctgaggggtttggccgccatgccattggaggtctccacggtcacctctatcaagtc
accaccttagcagatgacgggccaggatcacttagggatggatgcagaagaaatgaacca
ctttggattgtctttgaagtgtcaggcaccattcatcttcattcttacttgagtgtgtca
tcttataagactattgatggccggggtcaaagaataaaattcactgggaaaggtttgagg
ttgaaggaatgtgagcatgttattatatgcaatctagagtttgaaggtggaaggggacct
gatattgatgccattcagataaaacccaagtccaagcacatatggatagatcgttgcagc
cttcgagattatgacgatgggctgatagatatcacacgagaaagcactgatattactgtt
tctaggtgccattttgcacagcatgataagacaatgctcattggtgcagatccatctcac
attagtgacagatgtattcgtgttactattcaccattgtttttttgatgggactcgacag
cggcatcctcgtgttagatttggtaaagtacatttatacaataattacactagaaactgg
ggcatttatgctgtctgtgccagtgtagagtctcagatatattcccaatgcaacatttat
gaagcaggacagaagaaggtagcatttaagtatctcaccgagaaggcagctgacaaggaa
gaagcagggaccggctacataaggtcggaaggagacctatttgttactggaactcaggca
ggtttaatgttgcaaactgctgaatcctgtatgtttcatcccagtcagtactaccctaac
tggacggtggaagctccaaccgatgctcttaaacaggttctccagcattgtactggatgg
cagcatgttcctagaccagttgatcagaatcagatattgcctgcacaatgttag
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