Jatropha curcas (Barbados nut): 105636390
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Entry
105636390 CDS
T03922
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105636390
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105636390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
105636390
NCBI-ProteinID:
XP_037495827
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MKEEALLDDEKGGWTGWSEPLSKFGNEKNPENVSSNNLASHDLQENYENEDIKQEDDTEA
LLKQLGIDVEAGPSSEVNDTSTWIRWSEEESLRDHEQWMPVHGKSDGIYQSVGTPDKEAD
EQYLGVILFEDVSEYLFSLSSAEARFSLISQFIEFFGMDMSKWICTNNLSWTEKIFSLEV
LPDSIAQNLSLTGNGLVFLLGNTGDNSKRVDVMKFVRNAILLCLTAFPRNHILEEAALVA
EELSNARMDSSTPCRTLAKSLLKNDRQDLLLCGVYAKREAASGNIDHARRVFDMALSSIE
GLPLHLQSNASLLYFWYAEVELTNNCGDTQESSSRALHILSCLGTGAKYQPFEQKPSNMQ
LLRAHQGFKEKLKTVQSAWSHGSVDDQSVALICSAALFEELATWWTAGIEVLDEAFAMVL
PERRRQSYQLEFLFTFYTRMLLRHHTQSNSSNLWGSTLKGLQVYPCSSELFKAIVDITHL
YATPNKLRRLFDDYCNKKPSVIVWIFALSFEMSRGGSHHRIHGLFERALANESLRKSVIL
WRIYIAYEINIAHDHSAARRIFFRAIHACPWSKKLWLDGFLKLSSILSAKELSDLQEVMR
DKELNLRTDIYEILLQDDLISS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggaggctttgcttgatgatgaaaaaggtggttggactggctggtctgaacca
ttatccaaatttgggaacgaaaaaaatccagaaaatgtaagcagcaacaacttagcctct
cacgacttacaagagaactatgagaatgaagatatcaagcaggaagatgatactgaagca
ttgctgaagcagcttggtattgatgtcgaagctgggcctagcagtgaggttaatgacact
tcaacatggattagatggtctgaagaagaatcattacgagatcatgaacaatggatgcct
gttcatggaaaatctgatgggatttaccagagtgttgggacaccagataaagaagctgat
gaacaatatttgggggttatattatttgaagatgtcagtgaatacctattttcgttaagc
tcggcagaggctcgcttttctctaatatcccagtttattgaattctttggcatggacatg
tccaaatggatttgcacaaacaatttgagttggactgagaaaatctttagcctagaggtt
ttaccagattctatagcacagaatttgagcttaactggtaatggtttggtcttcctgttg
ggcaacaccggtgacaattctaagcgagttgatgtcatgaagtttgttcgtaatgctatt
ttactttgtttaactgcttttccacgtaatcacatattggaagaagctgctcttgttgct
gaagagttatctaatgcaagaatggattcttctactccgtgtcggaccctggctaagtcg
ctcttaaaaaatgatagacaggatttgttgctgtgtggagtttatgcaaaaagggaagct
gcttctggtaatattgatcacgctagaagagtttttgacatggcattatcatcaattgaa
gggcttccattgcatttacaatctaatgcttcccttttatatttctggtatgctgaggta
gaacttactaataattgtggagatactcaagagtcctcatctcgcgcattgcatatacta
tcctgcttaggaactggagcaaagtaccagccatttgaacagaaaccatcaaacatgcaa
ttgctgagagcacatcaaggatttaaagaaaaactgaagacagtacaatcagcatggtca
catggttctgtagatgaccagtccgttgctctaatttgttcggcagctttatttgaagag
ttggcaacttggtggactgcaggtattgaagtgttagatgaagctttcgctatggtgctt
ccagaaaggaggcgacaaagttaccaacttgaatttttgttcaccttttatacgaggatg
cttctaagacatcatacgcaatcaaactcatctaatctttggggttctaccttgaagggg
ctgcaagtatatccttgcagctctgaacttttcaaggccatagtggatataacccatctt
tatgcaacacccaataaattgcggcggctgtttgatgattactgtaataagaaaccttct
gtaattgtttggatttttgcattgtcatttgagatgagcagaggaggttcccatcacaga
attcatgggttatttgaaagagcattagcaaatgagagcttgcgtaaatcagtcatactc
tggcgtatatacatagcatatgaaatcaacattgcacatgatcattctgctgctaggcgc
attttcttccgagccattcatgcttgtccctggtccaaaaaactatggcttgatggtttt
ctaaaactgagttccatactatctgccaaggagttgtctgatctccaagaagtaatgcgg
gataaggagttgaacctcaggactgatatttatgagattttgttgcaagatgaccttata
tcatcataa
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