KEGG   Jatropha curcas (Barbados nut): 105636420
Entry
105636420         CDS       T03922                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105636420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jcu03021]
    105636420
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105636420
Enzymes [BR:jcu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     105636420
Transcription machinery [BR:jcu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     105636420
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     105636420
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 105636420
NCBI-ProteinID: XP_012075068
LinkDB
Position
Unknown
AA seq 203 aa
MKFRYAMVCSSNQNRSMEAHSLLKRQGFDVASYGTGAHVKLPGPSLREPNVYDFGTPYKQ
MFDDLRRKDPDLYKRNGILPMLKRNSSVKLAPQRWQDNAADGSFDIVFTFEEKVFDMVVE
GISIFLFHIYDLHNRDHVLMKSVLVINLEVKDNHEEAANGARLALDLCQEIDAVDSWEDL
IDEIITAFETKHRRKLLYSISYY
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaaattccggtatgccatggtttgttcatcgaatcagaatcggagcatggaggctcac
tctttgctcaagagacaaggctttgatgtggcctcctacgggacaggggctcatgttaag
ctccctggaccatcactgagagaaccgaacgtctacgattttggaaccccttacaagcaa
atgttcgatgatctcaggcgcaaagaccctgacctttacaagcgtaatggcatactgccg
atgctgaaaaggaattcctctgtcaaattggcacctcaacgttggcaagacaatgcagct
gatgggtcatttgatatagtcttcacatttgaagagaaagttttcgacatggttgttgag
ggtatcagcatcttccttttccatatttatgatctgcataatcgggatcatgttctaatg
aaaagtgttctggtgatcaacttggaagtgaaagataaccatgaagaggcagccaacgga
gctcgacttgctttagacctgtgccaagagatcgacgcagtggattcatgggaggatttg
atcgatgagatcataactgcatttgagactaaacacagacggaagctcttatacagtatc
tcctactactga

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