Jatropha curcas (Barbados nut): 105636420
Help
Entry
105636420 CDS
T03922
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105636420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105636420
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105636420
Enzymes [BR:
jcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105636420
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105636420
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105636420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
105636420
NCBI-ProteinID:
XP_012075068
LinkDB
All DBs
Position
Unknown
AA seq
203 aa
AA seq
DB search
MKFRYAMVCSSNQNRSMEAHSLLKRQGFDVASYGTGAHVKLPGPSLREPNVYDFGTPYKQ
MFDDLRRKDPDLYKRNGILPMLKRNSSVKLAPQRWQDNAADGSFDIVFTFEEKVFDMVVE
GISIFLFHIYDLHNRDHVLMKSVLVINLEVKDNHEEAANGARLALDLCQEIDAVDSWEDL
IDEIITAFETKHRRKLLYSISYY
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccggtatgccatggtttgttcatcgaatcagaatcggagcatggaggctcac
tctttgctcaagagacaaggctttgatgtggcctcctacgggacaggggctcatgttaag
ctccctggaccatcactgagagaaccgaacgtctacgattttggaaccccttacaagcaa
atgttcgatgatctcaggcgcaaagaccctgacctttacaagcgtaatggcatactgccg
atgctgaaaaggaattcctctgtcaaattggcacctcaacgttggcaagacaatgcagct
gatgggtcatttgatatagtcttcacatttgaagagaaagttttcgacatggttgttgag
ggtatcagcatcttccttttccatatttatgatctgcataatcgggatcatgttctaatg
aaaagtgttctggtgatcaacttggaagtgaaagataaccatgaagaggcagccaacgga
gctcgacttgctttagacctgtgccaagagatcgacgcagtggattcatgggaggatttg
atcgatgagatcataactgcatttgagactaaacacagacggaagctcttatacagtatc
tcctactactga
DBGET
integrated database retrieval system