Jatropha curcas (Barbados nut): 105636448
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Entry
105636448 CDS
T03922
Name
(RefSeq) WD repeat-containing protein 75 isoform X1
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105636448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105636448
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105636448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
EIF3I
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
105636448
NCBI-ProteinID:
XP_012075112
UniProt:
A0A067KK46
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MIRGGRSYVSSPPAFSNDAKRLLVCSGNSVSIFSAATGLQVTSLEGHTALVTAVIVVPAT
TQASKILCYCWTASLDGTIRYWDFSVPELIKTIDIKFPIFSMVIPSILGQPAESNEKPPK
VFAYLSTEKTKAPEMFSKGLRGQVIKFNLTDSRLAAGMILAETKKPLPITISCTGKYFGI
CSKRRLSIWKVPSADHERAAARKITLHHTKKMTVLAFHPTQRIVAAGDVTGRILIWRGYG
NRIFSAGNGLVSERSMNNEEERPGVRGDDDAESCTTWHWHSAEVNFLYFSSDGAYLYSGG
KEGVLVVWQLDTGKKKFLPRIGSPLLYYTDSPDPSLSSISCADNQIHILKMPSMEILKSI
SGIKLPCSFQEIHKDLCGGVAFDHNAGLVALRAENYCIQLYSLFDNRGISEVQVCERNHQ
PGDEVTVVVTLVALSLDGSMMSTAEVKLAEEGLGGLVCLKFWALGSDNKTFSLSTIVYEP
HRDAGISSIAFHPTRCMAVSSSYGGDFKIWVCNNGIQQKDQVLTNSRWTCHAVASYKKKP
MTAAAFSHDGSVLAVAAETVITLWDPDKNVLVAVIGETLMPIVTLSFVGKSEYLVSVSWG
SKPQLSVWSMSKLSISWSYGLHVEGIGAVVATETDLSSFAALVLLPKSSKYDKSNERTFR
GRDGVILLFNAADPVPISTWLVNKAKGGALAFLHVNQSFTENMFDGKPPKSLLAYLNGDH
EYVLFDPHGKEADEFLKIKRDGFTDLEEAGKFGYTSVYGELPEFDPKRVQSSWAPSVPSE
RPWETIFSGSSHNLPPLTKLCSAFLESLLEKRIATAE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgatacggggcggtagaagttacgtctcttctccgccagccttctccaatgatgcaaag
cgactcctcgtttgctctggaaactccgtctccatcttcagcgctgccactggcttacag
gtaacatctctggaaggacatacagctctggtgacggcagtgattgtggtgccagctacg
actcaggcgagcaagatattgtgctattgttggacggcttcgcttgatgggactattcgg
tattgggatttttcggtgccggaattgatcaagactatcgatattaagttccctattttc
tccatggtgattccatcaatattaggccaaccagctgagagcaatgaaaagccacctaaa
gtttttgcttatttgtctactgaaaaaactaaagcaccagaaatgttctcaaaaggttta
cgtggacaagtcatcaaatttaacttgactgactctcgtctggctgctggaatgattttg
gcagagacaaagaaacctctacccataactattagctgcactggaaaatattttggaatc
tgtagcaagcgccggcttagcatatggaaggtgcctagtgcagatcatgagcgtgctgcg
gctagaaagatcacactgcatcatacaaaaaaaatgacagttctggcattccacccgact
cagagaattgttgctgcaggggatgtgacaggaagaattttgatttggaggggttatgga
aatagaatattttctgcaggcaatggactagtgagtgaaagatcaatgaataatgaggaa
gaaagacctggagtgaggggtgatgatgatgctgagtcttgcacgacatggcattggcac
tctgctgaagtaaacttcctctatttctcttctgatggagcgtatttgtactcaggtgga
aaggaaggagttcttgtggtttggcaactagacacagggaagaagaaatttttgccacga
attggatctccactcctatattacacagattctccagatccttctctttcgtcaatatct
tgtgcagataatcaaattcatatattgaaaatgccttccatggaaattttaaagtccatt
tcggggatcaagcttccttgttcatttcaagagatacacaaggatttatgtggtggggtt
gcctttgatcacaatgctggcttagtggccttacgtgcggagaactattgcatccagcta
tatagcctgtttgacaaccgtggaatttctgaggttcaagtttgtgaaagaaaccatcaa
cctggtgatgaagtcacggtagttgtgactttagttgctctttcgttggatggctctatg
atgagtactgctgaagtgaagcttgctgaggagggcttaggtggacttgtttgtcttaag
ttttgggcattgggatcagataacaagacattcagcttgtccaccattgtttatgaaccc
cacagggatgctggcatttcttcaattgcatttcatcccacccgttgcatggctgtgagc
tcttcatatggcggggactttaagatttgggtttgcaacaatggtattcagcagaaagat
caagtgcttaccaattctagatggacttgccatgctgtggcctcgtacaagaaaaagcca
atgacagctgctgcattttctcatgatggttctgttcttgctgttgctgctgaaactgtg
attacattatgggaccctgacaagaatgttcttgtggcagtaattggggagactctcatg
ccaattgtgaccctctcgtttgtagggaagtccgagtatcttgtttctgtatcatggggt
tcaaagccgcaactttctgtttggagcatgtcaaagctttctatatcttggtcatacggg
cttcatgtagaaggaattggtgcagttgtagccactgagacagacttatcttctttcgct
gctcttgtccttcttcctaaatcatctaaatacgacaaatctaatgaaagaacttttaga
ggaagggatggagtgattttactttttaatgcagcagatcctgttccgatttctacctgg
ttggtgaataaggccaagggaggagctctcgctttccttcatgtgaatcaatcttttaca
gaaaacatgtttgatgggaaaccacctaaatccttgcttgcatacttaaatggtgatcat
gagtatgttctttttgacccacatgggaaagaagccgatgaatttctcaaaattaaacgg
gatggttttactgaccttgaagaagcagggaaatttgggtacacatctgtctatggtgag
cttccagagtttgacccaaaaagagtccagagttcatgggctccatctgtaccatctgag
aggccatgggagaccatatttagtgggtcatcacataaccttccaccccttacaaaactg
tgttcagcatttttggaatcattattggagaagaggattgcaactgcagagtga
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