Jatropha curcas (Barbados nut): 105636539
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Entry
105636539 CDS
T03922
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jcu03016
]
105636539
Enzymes [BR:
jcu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
105636539
Transfer RNA biogenesis [BR:
jcu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105636539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
105636539
NCBI-ProteinID:
XP_012075223
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MPIKQTGQKPVSPVQFQYFGRPKPSGRVEAIMEEENRCKFWLTRKNRFCANGRLNDSPFC
GNHKSRSDGQWIPCPIDPSHSVLKENLDGHVTRCPLLKQTQCLSLQPFYQKGINAGKEEE
EDITSEMKRNAIYGMTVSEFCKLIKKIESIHALICKDIVESYKMPEACNVWIRREIDRKL
PFQEKHVKQQASILGNLEDFGALKSYSEKEQCDGEGLYLDNAAPAVVEFGAGRGYLTQML
ADCYGIQMVFLVERKSYKLKADRSLRQKDNLTLERLRIDIEDLNLNAVESLLGLPFLAIG
KHLCGPATDLTLRCCLPEQSSETTMEKCSVNHSLKGLAIATCCHHLCQWKHYTNKKFIAD
LGITKEEFHAITWFTSWAVDADHGSDLSIDCELHLQYMGEDWCSGGANGIEDVVRNMKAV
DRAVLGFMCKQIIDTGRMMWAKERGMEAQLVKYVPSCISPENHLLIAKYAKCS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcctatcaaacaaaccggacaaaaaccagtttctccagttcaatttcaatatttcgga
cgacctaaaccttccggtagagtggaagcaataatggaagaagagaaccgttgcaaattc
tggctcaccagaaagaaccgattttgtgctaatggccgcctcaacgattctcccttctgt
ggcaatcacaagtcgaggtccgatggccagtggatcccctgcccgattgacccttcacat
tctgttcttaaagaaaatctcgacggacatgttacaagatgcccattgttgaaacaaacg
cagtgtttgtccctgcaacctttctaccagaagggcattaatgcaggtaaagaagaagag
gaggacattacatctgaaatgaagaggaatgctatttacggcatgactgtatctgaattt
tgtaaattaataaagaagattgagtcaatacatgctttgatatgtaaggatattgttgaa
tcttataagatgcctgaagcttgtaacgtttggattaggagagaaatagacaggaaatta
ccatttcaagagaaacacgtcaagcaacaagcatcaattcttggaaatttggaggatttt
ggggcgttaaagagttattctgaaaaggaacaatgtgatggtgaggggctatatctcgac
aatgcagcccctgcagtagttgaatttggagcggggagaggatacttgacacagatgctg
gcagattgttatgggattcaaatggtctttttggttgaacgaaaatcatataaacttaag
gctgatcgatctctgcgacaaaaagacaatttgacattagagcgtttgagaattgatatt
gaggatttaaacttgaatgcagttgaatcactgctgggtcttccttttctagctataggc
aaacatctttgtgggcctgcaactgatttgacgctaagatgttgccttccggaacaaagt
agtgaaactactatggaaaagtgcagtgtcaatcattcccttaagggccttgctatagca
acatgttgccatcatctttgccagtggaagcattatacaaataaaaaattcatagcagac
ctaggaatcacaaaggaagaatttcatgcaattacatggtttacaagctgggctgtagat
gctgatcatggatcagatctttctattgattgtgaattgcatctacaatacatgggggag
gactggtgcagtggtggtgcaaatgggattgaagatgtagtgagaaatatgaaagcagtt
gacagggctgtgttgggttttatgtgtaaacaaatcattgacacaggaaggatgatgtgg
gcaaaagaacgaggaatggaagcacagcttgttaagtatgtcccatcatgcatttctcca
gaaaaccatttattgatcgcaaaatatgccaagtgctcatga
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