Jatropha curcas (Barbados nut): 105636658
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Entry
105636658 CDS
T03922
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog isoform X2
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105636658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105636658
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105636658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
DUF7165
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
105636658
NCBI-ProteinID:
XP_012075368
UniProt:
A0A067KG60
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MSLISQNVGSKNRDKTRKEETDKPAFMEGNKEGDGREYDLVISKAKRRRKENEELDEGRE
MKRLENFLFGSLYSPIEFGKNDETRDGSASFFVDRSANSELSVYEEDSEFNEKSDLEEET
KQGKAVWVDDEEEKATINISKINRLRKLRKEEDESLISGREYVARLRVHHAKLNPGTEWA
RPGFQSRDDSESSDEGNGFAAAHGYEDAEFFSDILRTNEDLVVKSRSKLLPGRLEYSRLV
DANAQDASNGPINSVQFHRNAQLLLAAGLDRRLRFFQIDGKRNTKIQSIFIEDCPIHKAS
FLPDGSQVVIAGRRKFFYSFDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTIAFVGNEG
YILLVSSKTKELIGTLKMNGTARSLAFADDGQQLLSHGGDGQVYHWDLRTRTCIHKAVDE
GCIKGTALCSSPYGNLFAAGSDSGIVNVYNREEFLGGKRKPIKAIENLTTKVDFLKFNYD
AQILAICSHMKKNSLKLIHVPSFTTFSNWPPPNRSLQYPRCLDFSPGGGFMAVGNAAGKV
LLYKLHHYQHA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgatttctcaaaatgttggctctaaaaacagagacaagactagaaaggaggag
actgataaacctgcatttatggaaggaaataaagagggtgatggtagagaatatgatttg
gttatatcaaaagccaaaaggagaaggaaagaaaacgaagagcttgatgaaggaagggaa
atgaaaaggttggagaattttttgtttgggtccctatactctcctattgaatttggaaaa
aatgatgagactagggatggttctgcttcattctttgtggaccgttcggcaaatagcgaa
ttgtctgtttatgaggaggattccgaattcaatgagaaaagtgaccttgaagaagaaact
aaacaagggaaagctgtatgggttgatgatgaagaggaaaaggccacaattaatatttct
aagattaataggttaagaaaacttaggaaggaagaggatgagagcttgatttcaggtcgg
gaatatgttgcaagattaagggttcatcatgcaaagttgaatccaggaactgagtgggct
cgacctggttttcagtcaagagatgatagtgaatcatcagatgaaggaaatggctttgca
gcagcacatggttatgaggatgctgaattttttagtgatattcttcgaacaaatgaagat
cttgtagtgaagagcaggtcgaaactgttgcctgggcgtcttgagtactcaagacttgtt
gatgcaaatgctcaggatgcatccaatggtccaataaattcagtgcagttccatcggaat
gcacagttgctacttgctgctggattagatcggaggctaaggttttttcaaattgatggt
aaacggaatacaaaaatacaaagtatcttcattgaggattgccccattcacaaggcatca
ttcttacctgatggatcacaggttgttatagcaggaagaagaaaattcttttacagcttt
gatttagtgaaagcaaaagttgataaaattggccccttagttggcagggaggagaagagc
ttggaagtttttgaggtttccccagattctagcacgattgcttttgtggggaatgaaggt
tatatcttgttggtgtcatccaaaacaaaggagcttattgggactctgaagatgaatgga
actgctcgttctttagcttttgcagatgatgggcaacaattattgagccatggaggtgat
ggacaggtctatcactgggatttgagaaccaggacatgcattcataaggctgttgatgaa
ggttgtataaaaggcacagcactttgcagttctccatatggaaatttatttgctgctggt
tcagatagtggcatagtaaatgtttacaacagggaggaatttttaggtggaaagagaaag
ccaatcaaggcaattgaaaatttgaccactaaagtggattttttgaaatttaattatgat
gctcagatattagccatttgctcacacatgaagaagaatagtttaaagttgatacatgtc
ccatcatttactaccttctctaactggcctcctccaaataggtccctgcagtatccccgc
tgtttagatttcagtcctggtggaggtttcatggctgtaggaaatgctgctgggaaagta
ttgttatacaagctacaccattaccagcatgcatag
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