KEGG   Jatropha curcas (Barbados nut): 105637094
Entry
105637094         CDS       T03922                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03030  DNA replication
jcu03410  Base excision repair
jcu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105637094
   03410 Base excision repair
    105637094
   03420 Nucleotide excision repair
    105637094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jcu03032]
    105637094
   03400 DNA repair and recombination proteins [BR:jcu03400]
    105637094
Enzymes [BR:jcu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105637094
DNA replication proteins [BR:jcu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    105637094
DNA repair and recombination proteins [BR:jcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      105637094
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 105637094
NCBI-ProteinID: XP_012075886
LinkDB
Position
Unknown
AA seq 2219 aa
MNADNQRRDRKDFGRRPKKQKLIRNAEEELDSKFGFNLFTEGDKRLGWLLNFAPSSWEDQ
ETRKTHSCVDLYFVSQDGSTFKSKFKFRPYFYAATKDKMEMDVEAYLRRRYESQIADSEI
VGKEDLDLKNHLSGLHKRYLKISFSTVQQLMDVKKDLSHVVERNQAKFNTAEAYESILTG
KREQRPQDFLDCILDLREYDVPYHVRFAVDNDIRCGQWYDVSVSSSGVMLEKRTDLLQRA
EVRICAFDIETTKLPLKFPDAGYDLIMMISYMVDGQGYLIINRECVGEDIEDIEYTPKPE
FEGCFKVTNVQNEVELLRQWFTHMREVKPGIYVTYNGDYFDWPFLESRAAYHGLKMSDEV
GFSCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR
FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQAYKANVICPNKHQSDPEKFYKSHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAY
DQLIKNLDRDLQYAIRVEGKMDLDTVSNYDEVKNAIVEKLARLRDEPVREECPLIYHLDV
AAMYPNIILTNRLQPPSIVTEEICTACDFNRPDKTCLRRLEWVWRGEIFMAKKSDYYHLK
KQIESEFVDGTDGQLSKSFLDLPKMEQQSKLKERLKKYCQKAYKRVLDKPVTEVREAGIC
MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCV
LPGSFPENFTFKTMDLKKKLTISYPCVMLNVDVARNNTNDQYQTLEDPVNKTYETHSECS
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLHGSTLEECYSAVAAVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGQ
QKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPRGTPVSERAVPVAIFETDTEIMKF
YLRKWCKTSSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKK
VREKEDKFRQRKLIDIFSLSNKDDSLRKTTDVVTASYMMDKENVEDLEDFQNKRNSINGP
RPIVRCYEVNNEKCSLKATGRMDFSEQKLDNGESASEMSIENIDRNVDYQGWLEQKKRKW
KDTLDRRKRQRLGNLRNSNRANGAYEPLGSMMNHKKDQRRTGVGSYFTTHEIALTQCHWQ
IIQLLPSPHIGQFFAWVTVEGIMLKIPITVPRVFYLNSKAPITERFPGRHVKKTLPHGRH
CYNLVEVVIDEDKFRKESKKLAALLADPEVEGIYETKVPLEFNAILQIGCVCKVDKTAMK
RNAQDGWSLNELHMKTTTECSYLEQSVSYFYLYHSISEGRAIFVVYMPILRTVSVVVVNP
YQNKDLSPSFLERQFREACHALSVEPPPPRNGIVCKVDYVGYVKDAQRVLQGTISEIRDK
HHGPTLAVTECPNAQLMKSGIPALDNFPCVNIPSNARDSQYPVLGWQQAAAKIGMQRSVA
SSQWLNERISLSRYAHVPLGNFELDWLIFTADVFMSRALHDQQQLLWISDDGVPDLGGIS
EESTCFADEVHQPVITYPGAYRKVSVELKIHHLAVNALLKSNQVNELEGGALLGFDQDIN
SGSHISDDQYGFDEATSCAPALRVLKQLIQRCLADAVTSGNVFADAMLQHLYRWLCSPQS
KLHDPALHRILHKVMQKVFALLLAELRKLGASIIFANFSKVIIDTGKFSLSAAKAYCDSL
LKTLQTRELFEWIELEPMQFWHSLLFMDQYNYGGIPAKADDTSANESQGDNSQRDQSQVD
IVSSWNIAEYLPKKIQDHFVLIVSEFMFIPWDYAQKQDAKRASLQDVSSCTPSITIAAAE
TFESHLVEHLKGQISTYFTDKLLGIVRDTLLHMKGINKPEDERQISSGFSQIGGSIPKGD
PALEFIKHVCAVLALDNNVQHEVLVMRKNLLKYVRVREFAPEAEFHDPCPSFVLPNVICS
YCNDCRDLDLCRDSALLAQEWRCAVPQCGQPYNREVMENALLQIVRQRERLYHLQDLVCT
RCNQVKAAHLAEQCACAGSYRCKEDVSEFRRKMQIFLNVAIHQKFQLLQECTSWILEVQ
NT seq 6660 nt   +upstreamnt  +downstreamnt
atgaacgccgataaccagagacgggaccgcaaggattttgggcggagaccaaagaagcag
aagctgatccgtaacgccgaagaagaacttgactcgaaattcggtttcaatctattcaca
gaaggagataaacgccttgggtggctcctcaattttgcaccctcatcttgggaggatcaa
gaaacgcgcaaaacgcacagttgtgttgatctatactttgtttcccaggatggttctact
ttcaagtcgaagttcaaattccgtccttatttctatgctgctacaaaggataaaatggaa
atggatgttgaggcctatttgcggaggcgctatgaaagtcaaattgctgatagtgagatt
gtgggaaaggaggacctagatcttaaaaaccatttgtctggtttacacaaacgatatttg
aaaatatcattttctactgttcaacaattaatggatgtgaagaaagatctatcacatgtt
gttgaaagaaaccaggcaaagtttaatactgcagaagcatatgagtccatattaacaggg
aaaagagaacaacggcctcaagattttctagattgtatacttgatctccgagagtatgat
gtgccataccatgttcgttttgccgttgataatgatattcgttgcgggcaatggtacgat
gttagtgtatccagtagcggtgttatgcttgaaaagaggactgatcttctacaacgtgct
gaagtccgcatatgtgcatttgatattgaaactaccaagcttcctttgaagtttccagat
gctggatacgatttgataatgatgatatcatacatggttgatggacaaggctatttaatt
attaacagagagtgtgtaggggaagatatagaggatatagagtacacaccaaaaccagaa
tttgaagggtgcttcaaagtgaccaatgtgcaaaatgaggtggaacttcttaggcagtgg
tttacccacatgagagaggtaaaacccggtatttatgttacatacaacggtgattatttt
gactggccattcctggaaagcagagcagcttatcatgggttgaagatgagtgatgaggtt
ggattttcatgtgacaagaatcagggggagtgccgttctaaatttgcttgccatttggat
tgttttgcttgggtcaaacgtgatagttatttgcctcaggggagtcagggccttaaggct
gttacaaaggcaaaattgggatatgatccattggaggtgaatccagaagacatggtacgc
tttgcaaaagaaaagcctcagatgatggcctcttattcagtttctgatgctgttgcaact
tattatttgtatatgacctacgttcatccgttcattttctctcttgcaacaataattcct
atgtcaccggatgaagttttacgcaaaggcagtggtacactatgtgaaatgcttcttatg
gtgcaggcatacaaggcgaatgttatctgccctaacaaacaccaatctgaccctgagaaa
ttctataagagccaccttcttgagagtgagacgtatattggtggccatgtggagtgcctt
gaaagtggtgttttcagatctgatctaccaactagttttaagcttgatccatccgcatat
gatcaactgataaaaaacttggaccgagatcttcaatatgccataagagtggagggtaag
atggacttggatactgtctccaattatgatgaagtgaagaatgctatcgtggaaaagctt
gcgaggttaagggatgaacctgtacgtgaggagtgcccccttatttatcatctagatgtg
gcagcaatgtatccgaacattattttgacaaacaggcttcagccgccatctatagttaca
gaagagatttgtactgcctgtgacttcaaccgtccagacaaaacttgtcttagaaggctt
gaatgggtttggcgtggagagatctttatggcaaagaaaagtgactattatcatttgaag
aagcaaattgagtctgaatttgtcgatggcactgatggtcagttgtcaaaatcttttctt
gaccttcccaagatggagcaacaatcaaagctcaaagagcgtctaaagaaatactgtcag
aaggcatataaacgggtacttgacaaacctgtcaccgaagttcgagaagcagggatatgc
atgcgtgaaaactcattttatgttgatactgttcggagttttcgggacagaagatacgaa
tataaaggacttaacaaggtttggaaagggaagttgtcagaagcaaaggctagtggaaat
tccattaagatccaggaagcacaggatatggttgtgctttatgattcactgcaacttgca
cacaagtgtatacttaattcgttctatggatatgtcatgcggaagggtgcaagatggtac
tcaatggaaatggctggtgtagttacatatacaggagctaaaataattcagaatgctcgt
ttgcttgttgaaaaaattggaaaaccacttgaattggacacagatggtatttggtgtgtg
cttcctggatcttttccggagaattttacattcaaaacaatggatttgaagaaaaaactg
acgatctcatatccctgtgttatgcttaatgttgatgttgcaagaaacaatacaaatgat
caataccagacacttgaagatcctgtaaataaaacatatgaaactcatagtgaatgctca
attgaatttgaagtggatggcccgtacaaggcaatgattcttcctgcttctaaggaagaa
ggaattttgattaagaagcgatatgctgttttcaatgatgatggaacccttgcagaactt
aaaggttttgaaatcaagcgtaggggtgagctgaagctcatcaaagttttccaggctgag
ctttttgataagttcctccatggatcaaccttagaggaatgctattctgctgtagctgct
gtagccaaccgctggcttgatcttcttgataatcaaggaaaagatattgctgacagtgaa
ttgctcgattacatatctgaatcaagcacaatgagcaagtccttggtagactatggtcaa
caaaagtcatgtgcagtaaccactgcaagacgtcttgcagattttcttggtgatacaatg
gttaaagataagggattgcgttgtcaatatatagtagcttgtgaaccaaggggtacacct
gtgagtgagcgtgctgttcctgttgcaatatttgaaactgatactgaaataatgaagttc
tatttacgaaaatggtgcaagacttcatcagatgtaggcatcagatccatcattgattgg
tcctattacaagcaacgactcagttcagcaattcagaaaatcattacaattcctgctgca
atgcagaaggttgcaaatcctgtccctagggttgttcatcctgattggctgcataaaaag
gttcgtgaaaaggaggataaatttcgtcaaagaaaattgattgatatcttcagcttatcc
aacaaggatgattcattaaggaagaccactgatgttgttacagccagttatatgatggat
aaggagaatgttgaggatttggaagacttccaaaacaaaaggaattctataaatgggcct
agaccaattgttcgttgttatgaggttaacaatgaaaaatgttcactcaaggcaactggg
agaatggatttttcagaacagaaacttgataacggtgaaagtgcgtctgaaatgtctatt
gaaaatattgatagaaatgtagattatcaagggtggcttgaacagaagaaaagaaagtgg
aaagatactttggaccggaggaagaggcaaaggttgggcaatttgaggaattcaaatcgt
gccaatggtgcttatgagccactaggcagtatgatgaatcataagaaagatcagcgccgg
actggtgttggttcatattttacaacacatgaaattgcccttacacaatgccactggcag
ataatacagctgcttccaagtccacatattggccaattttttgcttgggtcactgttgaa
ggaatcatgcttaagattcctataacagttccaagagtattttaccttaactctaaagca
ccaataacagaaagatttcctggaaggcatgtgaagaagactcttcctcatggaaggcat
tgctataatttagttgaggttgtcattgatgaagataaatttagaaaagaaagcaaaaaa
cttgcagctcttcttgcagatccggaagttgagggaatatatgaaacaaaggtgccattg
gagtttaatgccatcctccagattggttgtgtctgtaaagtggataaaacagccatgaaa
cggaatgcacaggatggctggagtctgaatgaactgcatatgaagacaacaacggaatgt
tcttatttggagcaatcagtctcctacttttacctctatcatagcatctctgaaggacgt
gctatatttgttgtctacatgcctatattgagaactgtatctgttgtggtggtcaatcct
tatcaaaataaggatttatcaccatcttttcttgaaagacaatttcgcgaagcttgccat
gcattatctgttgaaccaccccctcctaggaatggtattgtttgcaaggttgattatgtt
gggtatgtgaaggatgctcaaagggtgttacagggaacaataagtgaaatcagagataaa
caccatggacctacacttgctgttaccgaatgcccaaatgctcagctgatgaaatcaggc
attccagctcttgataatttcccttgtgtgaatataccttccaatgctcgtgacagtcag
tatccggtccttgggtggcaacaagcagctgcaaaaattggaatgcaacgttctgtggca
tcatctcagtggttgaatgaaaggatttctctttcaagatatgcccatgtaccactgggg
aactttgaacttgactggctcatatttacagcagatgtcttcatgtctagagcactgcat
gatcagcaacagttactatggatatctgatgatggtgttccagatctaggaggcattagt
gaagaatctacttgttttgcagatgaggtccatcaacctgttattacataccctggagca
tatagaaaagtttctgtagagttaaagattcatcacctggctgtaaatgctctgctgaaa
agcaaccaagtgaatgaattggaaggaggtgctttgttaggatttgaccaggacataaat
tctggttcacacatttcagatgatcaatatggctttgatgaggctacctcatgtgctcct
gcattacgtgtcctgaaacagctgatccagaggtgccttgcagatgcagtcacatcgggc
aatgtctttgccgatgcaatgttgcaacatctttatcgatggctttgcagcccccaatca
aagcttcatgacccagctcttcaccgaatactccacaaggtcatgcaaaaggtgtttgct
ttgctgttggctgaacttcgcaaattaggtgcctcaatcatatttgcaaatttttcaaag
gttattatagacactggaaagttcagtctatctgcagcaaaagcttactgtgatagcttg
ctcaaaactttgcaaactagagaactatttgaatggattgagcttgaacctatgcagttt
tggcattccttgctttttatggaccagtataactatggtggaattccagccaaagctgat
gacacttcagcgaatgaatcacaaggcgataattcccaaagagatcaatcacaagtggat
attgtatcaagctggaatattgcagagtacttgcccaagaaaattcaggatcattttgtt
ttaattgtttcagaatttatgtttattccctgggattatgctcaaaagcaagatgcaaag
agagcatctttgcaggatgtcagctcatgtactccatcaatcaccattgcagctgctgag
acatttgaatcgcacttggtggaacaccttaaagggcagatcagcacttacttcacagac
aaacttcttggaattgttcgtgatactcttcttcatatgaaggggataaacaagccagag
gatgaaagacaaatttcttctggtttttcacagattgggggtagcattcctaaaggggat
cctgcattggaattcattaagcatgtctgtgctgttctggcccttgacaataatgtgcag
catgaagttctggtgatgagaaaaaatctattaaaatatgtacgagtgcgggaatttgct
cctgaagctgagtttcatgacccctgcccttcctttgtcttgccaaatgtaatttgcagc
tactgcaacgactgccgagatctggacttgtgtcgtgactcggccttactggctcaggag
tggcgttgtgctgtcccacagtgtggccagccttataaccgagaggtgatggagaatgct
cttcttcaaattgtccggcaaagggaacgtctctatcatttacaggacctggtgtgcaca
aggtgcaaccaggttaaagctgcacatttagcagaacaatgtgcatgtgctggatcatat
agatgcaaggaagatgtgtctgaattccgcaggaaaatgcagattttcttaaatgtagca
attcaccagaagtttcaactccttcaagagtgcacttcatggattttagaagttcaatag

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