Jatropha curcas (Barbados nut): 105637470
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Entry
105637470 CDS
T03922
Name
(RefSeq) elongation factor 1-alpha isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105637470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105637470
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105637470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
zf-RanBP
GTP_EFTU_D4
Mg_chelatase
Nitr_red_assoc
Motif
Other DBs
NCBI-GeneID:
105637470
NCBI-ProteinID:
XP_012076329
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MPRKINYGVDYDEDYDDYEEYDYEYDDEDTGKAPQPQQEVSRPGIWRCAICTYDNEEDMS
ACDICGVIRNPTAGNHNKADKRTADSVCKDSGVSMMAKSLFGLLPHQTPHKPVVAQLQED
EFVANREKGASNFLKSPFKFDIPSPDDLVSNGLHSSKKGSRANAVNHKSPRASSGISDKN
GATNAQSTIKRSDSSSLLIQKGEQGSVDEGRYAPTRVAYTESWSESSDNSSALVPKSGSN
RMDESICSKSGTLYIQSSDETLESSSSLMPESKNISMDDGSSSIIEGEPHRLTSNLNNMS
LSDKSGNLASVNDRKSKPIAQYEPDKWMVPDKADNSLTQLNLAIVGHVDSGKSTLSGRLL
HLLGRITQKEMHKFERDAKLHGKGSFAYAWPLDESSEERERGITMTVAVAYFDTKRYHVV
LLDSPGHKDFVPNMISGATQADAAILVIDSCFGAFEAGMDSKKGQTREHAQLIRSFGVDQ
IIVGINKMDAVDYSKDRFDFIKTQLRTFLRSCGFKDSLISWIPFSAMENQNLVSAPSDVN
LSSWYCGPCLLDAIDSFQPPSRDFSKPLLMPVCDVIKVTSSGQVSVCGKLEAGALRSGSK
VLVMPSGEVGTVRTLERDSCACSLARAGDNVVVTLMGIDGSKVMAGGVLCHPDFPVAVAK
HLELKVLVLDFATPILNGSQLEFHIQHTKEAARVVRIVSLLDPKTGKVAKQTPRHVSSKQ
HAVVEVMLQGPVCVQEFSSCKALGRVSLRVLGRTIALGVVTRIIEEQD
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaaataaattatggggtcgattatgatgaagattatgatgattatgaagaa
tatgactacgaatatgatgacgaggacactgggaaagcacctcagcctcagcaagaagtt
agtaggcctgggatatggcgttgcgccatttgcacttacgataacgaggaggatatgtct
gcatgtgacatttgtggggtaattcgtaatcccactgcaggcaaccacaacaaagctgat
aagagaacagcggacagcgtgtgcaaggattctggagtatccatgatggcgaagtctctt
tttgggttattgccacatcagacaccccacaagcctgtggtagctcaactacaggaagat
gaatttgttgctaaccgggaaaagggggccagtaactttcttaagtctcctttcaagttt
gatattccatctccagatgatttggtttctaatggattgcattcctccaaaaagggttca
agagccaatgctgtcaatcacaaatctccaagagcttcttcaggcatatctgacaagaat
ggtgcaactaatgcacaatctactataaaaaggtcagatagttcttctctgttgattcaa
aaaggcgaacaaggtagtgtggatgagggccgttatgcaccgaccagagtggcttataca
gagtcatggtctgaaagttcagacaactcttctgctttggtgcccaagtctggatctaat
agaatggatgagagcatttgttcaaagagtggtacactctacatccaatcaagtgatgaa
acattggagagctcatcttcattgatgcctgaaagcaaaaatataagtatggatgatggc
agttcttcaataattgagggtgagcctcacaggcttactagtaatttgaacaatatgtct
ctgtctgataaatctggaaacttagcaagtgttaatgatagaaaatccaagccaattgca
caatatgaacctgataaatggatggtccctgacaaagcagataactccttaactcaactg
aatcttgctattgttggtcatgttgattctggaaaatcaactctttctggaagattgcta
catcttttaggacgaataacccaaaaagaaatgcacaaatttgaaagagatgccaagttg
catggcaaggggtcctttgcttatgcttggccgctggatgagagttctgaagaaagagaa
agggggataactatgacagtggctgttgcttattttgataccaaaagatatcatgttgtt
ctgcttgattccccaggccacaaagattttgttccaaacatgatttctggagcaacacaa
gctgatgctgcaattcttgtcatagattcctgttttggtgcatttgaagctggcatggac
agtaagaagggccaaacaagagagcatgcacaacttattagaagctttggtgttgatcaa
attattgttggaattaacaaaatggatgctgtggactactccaaagataggtttgatttt
atcaaaacacaacttcgaacatttctccgttcatgtgggtttaaggattccttgatttca
tggataccattcagtgccatggaaaatcaaaatttggtgtcagctccttctgatgtcaat
ttgtcatcctggtattgtggaccttgtctgttggatgcaattgattcttttcaacctccc
tcaagagatttctcaaaacctctgctcatgcctgtatgtgatgttattaaagtaacttca
tcaggacaggtgtcagtctgtggtaaattagaggctggagctcttcgtagtggatcaaaa
gttttggttatgccctctggagaggtagggacagtgcggacactagaacgtgactcttgt
gcttgttctcttgcaagagctggagataatgtagttgtcactctaatgggcattgatggg
agtaaggtgatggctggaggtgttctttgtcatcccgatttcccagttgctgttgcaaaa
catctggaattgaaggtgttggttttagattttgcaaccccaattctgaatggctctcaa
ttggaatttcacatacagcatacgaaagaggctgcaagagtcgtaaggattgtatcatta
cttgatccaaagactggcaaggtggcaaaacagacacctcgtcacgttagttcaaagcag
catgctgttgttgaggtcatgttacaaggaccagtttgtgtgcaagagttctcaagttgc
aaagctcttggaagggtgtctttgagagtattagggagaaccattgctttaggtgttgta
accaggataattgaggagcaggattag
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