Jatropha curcas (Barbados nut): 105637562
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Entry
105637562 CDS
T03922
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105637562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105637562
03036 Chromosome and associated proteins [BR:
jcu03036
]
105637562
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105637562
Coactivators
SAGA/TFTC/STAGA complex
105637562
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105637562
STAGA complex
105637562
TFTC complex
105637562
SAGA complex
105637562
SLIK complex
105637562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD_LRWD1
Tricorn_2nd
Cytochrom_D1
RAB3GAP2_N
Beta-prop_ACSF4
PROPPIN
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
105637562
NCBI-ProteinID:
XP_012076440
UniProt:
A0A067KET0
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MDEDQVVKFVETYLKKKGFKQAELAFHDEVQHSSNANSLDIHTDPDLSALLLSLSQPGDT
PAKYHDEYGKLRAWTHSSLDLYKPELLRVLYPVFVHCYMDLVAKGHIQEARTFFNSFRED
HETMHSRDLQKLEGALSPSHLEEMEFAHTLRQSKVNIKICQYSNELLMQYLRNTKSTTML
GVVNEHINFLVSPGQPSSVSDDAEVVTLIGSSQDAANQINKKEIHWGLLEDSLEERLEKA
GGLLSDSEKTEGEAKEGDMDDAKKRSIEGGKQGASVKKLKKDKAASATAKVARHEPNIAS
SAPRVKPELPLPVIPTEVEQSILEDLRNRVQLSSAALPSVSFYTFINTHNSLNCSSISQD
GSLVAGGFSDSSLKVWDMAKLGQQASNSVLQGENDIAPSEHVLGPNGVKRSYTLFQGHSG
PVYSATFSLLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASAS
HDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRI
FIGHRSMILSLAMSPDGRYMASADEDGTIMMWDLSTGRCVSPLMGHNSCVWTLAFSCEGS
LLASGSADCTVKLWDVTSSTKVPRAEDSKSGTANRLRSLKTLPTKMTPVYTLRFSRRNLL
FAAGVLSKSV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaccaagtagtgaaatttgtcgagacgtatctgaagaagaaaggatttaaa
caagctgagctagctttccatgatgaagtacaacatagctctaatgccaattccctcgac
attcacaccgatcctgatctatccgctctgctcctttcgctctcccaaccaggggataca
ccagcaaagtaccatgatgaatatggtaaactaagagcatggacacatagttcgcttgat
ttgtacaagcctgagttgcttcgtgtgctctatccagtatttgtacattgttatatggat
ctggttgcaaaagggcatatccaagaggctagaacttttttcaacagctttcgtgaggac
catgagacaatgcattcacgggaccttcaaaagctggaaggagctctttctccctctcat
ttggaggagatggaatttgctcatactcttaggcaaagcaaagtcaacataaagatatgt
cagtactccaatgagctcctgatgcagtatctacgcaatacaaaatctactacaatgctt
ggggttgtcaatgagcatattaacttcctagtttctcctggacagcccagctcagtttca
gatgacgctgaggttgtaacactaattggaagcagccaggatgcagcaaatcagataaat
aagaaagaaatacattgggggctgcttgaagattctttagaggaacgcttagagaaggca
gggggtttgctctcagattctgaaaagacagaaggagaagcaaaagagggggacatggat
gacgccaagaaaagatctatagaaggcggaaagcaaggtgcttctgtcaaaaagttgaaa
aaggacaaagctgctagtgcaactgcaaaagttgcacgtcatgagccaaatattgcatct
agtgcaccacgagtcaaaccagagcttcctttgcccgtaattccaacagaggtggaacag
tccattcttgaagacttgaggaaccgtgtacaattgagcagtgccgcattgccatctgtt
agcttttatacttttatcaatacacataatagtttgaattgttcttcaatatcccaggat
ggatctttagttgctggtggattttcagactcttcactaaaggtttgggatatggccaaa
ctcgggcaacaagctagcaattctgttttgcagggtgaaaatgatattgctcctagcgaa
catgtcctaggaccaaatggtgtcaaaagatcctacaccttatttcagggtcattcaggc
cctgtttattctgccactttcagcctgcttggtgactttatactgtcctcttcagcagac
actacaattagattatggagcacaaaactaaatgcaaatctagtttgctacaagggtcat
aattatcctgtatgggatgttcagttcagtcctgtaggacattattttgccagtgcttca
catgatcgaacagcaaggatttggtccatggatagaatacagcctttaagaataatggca
ggtcacttgtctgatgttgattgtgtacaatggcatgccaactgcaattacatcgctaca
ggctccagtgacaaaacagttagattgtgggatgtacagagtggggagtgtgtacgaatt
ttcattggtcataggagtatgattttatctctggcgatgtcacctgatggcaggtatatg
gcatctgctgatgaagatggcacaattatgatgtgggacctttcaactggccgctgtgta
tcacctttgatgggccataattcatgtgtatggacgctagctttcagttgtgaaggctca
ctgcttgcatctggttctgctgattgtactgtgaaattgtgggatgtaacctcaagcacg
aaggtaccaagggctgaagacagcaaaagtggaactgcaaacagattaagatcactgaaa
actctgccaacaaaaatgacgccagtctatacattaaggttttctcggaggaatcttctg
tttgctgctggagtactttcaaaaagtgtgtaa
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integrated database retrieval system
