Jatropha curcas (Barbados nut): 105637645 Help Entry 105637645         CDS       T03922                                  Name (RefSeq) RNA-dependent RNA polymerase 6   KO K11699   RNA-dependent RNA polymerase [EC:2.7.7.48] Organism jcu  Jatropha curcas (Barbados nut) Brite KEGG Orthology (KO) [BR:jcu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:jcu03036]     105637645 Enzymes [BR:jcu01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.48  RNA-directed RNA polymerase      105637645 Chromosome and associated proteins [BR:jcu03036]  Eukaryotic type   Gene silencing    RNA interference (RNAi) pathway     RDRC (RNA-directed RNA polymerase complex)      105637645 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RdRP UTP20_N Motif Other DBs NCBI-GeneID:  105637645 NCBI-ProteinID:  XP_012076580 UniProt:  A0A067KP71 LinkDB All DBs Position Unknown AA seq 1199 aa AA seqDB search METQKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEI TDAAAIHRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHL NQRRRKNIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAF SIKDTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVS VPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLR RPLKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRN QSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTP TRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS FSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQIRKWMG RFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAKE VAEKLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT RFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGNT AAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQ CFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLH HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLN RPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKT GKLVTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLSG DIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSR KQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWI KKSLELQESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRIC NT seq 3600 nt NT seq  +upstreamnt  +downstreamnt atggagacacagaaaagtgagaaagacacagtcgtaactcaagttagttttggtggattt gacaatcatgtcaaagcaaaagatttagtggcgtatttggaagaggagataggacaggtt tggcgttgtagactgaagacatcctggacgcccccagagtcctatccaaattttgagatt actgacgctgcagccatccatagaacacatgaatataagagggtagagccccatgcattt gtgcactttgcctcggctgaatcagctacatgggctaagaatgctgcagggcactgtgag cttttcctgaatgacaggccgctgaaggttagtctagggcctgaaaatccatttcacttg aatcagaggaggagaaaaaacattccttttaaattatctgatgtatgtattgagattgga accttggttagccgtgatgagttcttggttggttggagaggaccttcttctggagttgat tttcttgtggatcctttcgatgggacatgcaagttttgtttcaccatggacactgccttt tccatcaaggacacaactaagcatgcaattatcagatgtgattttaagttggagttcttg gtgagagacatcaatgaggtaaagcagtacaccgacacctcatgtatagttatccttttg cagttggcttccgcacctttggtctggtatagaactgcggatgatgacattgaagtctct gttccatttgatttgttggatgatgatgatccttggattcggaccactgattttacaccc agtggtgccattggcaggtgcaacttttatagagtttcgattcctcctcgtcacggtgca aagttgaagagggcgaggaactttctaaaagaacgaagggtgcaggaggactccctccga cgaccgcttaagattgtgaatgaaccagattatgggatgcctatgtcagatcctttcttc tgtattcatcacaaggaagggatagcttttgagataatgttcctcgtgaatgctgtgatg cataaaggaatattcaatcaacaccaactatctgacaatttctttgatttactgagaaac caatctctggatattaatgtcgctgcattgaagcacatctgttcttacaagcaacctgtg tttgatgctcataaggggctcaaagctgtccaagaatggttgctgaagaaccccaaactc tttaagcgctctaaacagctggatgatattgtggaaattaggcgcttggctcttacacca actagagcttattgcctgccacctgaagtagaactttccaatagagttttgagaaaatat aaaaatattgctgatcggtttctaagggtaaccttcatggatgagggcttgcagacaatc aatgcaaacacccttacttattatgttgctcctatagtgagagacataacgtctacctct ttctctcaaaagacaagaatcttcagaagggtgaagagtattctgacagatggctttaac ttgtgtggccggagatactcatttttagccttctcatccaatcaattgagagatcgctct gcttggttttttgccgaagatggtaaaattagtgttggccaaatcaggaagtggatgggg aggttcaccaacaggaacattgcaaaatgtgctgcccggatgggccagtgtttctcttct acatatgctactgtagaagttccatcatctgaagttaatcatgcccttccggatattgag aggaatggttatatcttctctgatggtattggcacgataactccagatctcgcaaaggaa gttgctgaaaaactgaagttggacattaatctaccttgtgcttaccagattagatatgct ggttgtaaaggagttgtagcctgctggccggctcaaggtgatgggatccgcctgtctttg aggcctagtatgaacaagttccagtcaaaccataccaccttggagatatgctcttggact agatttcagcctggtttcttaaacaggcagataataaccttgctttccactctaaatgtt tcagatgaagtgttttgggaaatgcagacagctatggtctccaaactgaataagatgcta actgatgccgatgttgcatttgatgtcatcactaaatcatgtgctgagcaaggtaacact gcagcaataatgttaagtgcaggtttcaagcctcaaaatgaacctcatttacgaggcatg ctaacttgtattagagctgcacagttttggggccttagagaaaaagctagaatctttgtg acctcagggagatggttgatgggctgcttggatgaactaggggtgctcgaacaaggccag tgctttatccaagtgtctaacccatgtttagagacctgtttctctaagcatggctcaaag tttagtgagaccaagaaaaacctgcaagtaatcaaagggaccgtggtgatagctaaaaat ccatgtcttcatccaggagatgtaagaattctggaggctgttgatgctcctggtctacac catttacatgattgccttgtcttcccgcagaagggtgacagacctcacacaaatgaagct tctggaagtgacctggatggagatctgtactttgtgacatgggatgataaccttattcct ccaagtaagaagagctggacaccaatgcaatatgatgctgcggaagccaaactcttgaat cgccctgtcagtcatcaggatattatagatttttttgcaaaaaacatggtaaatgagaat ctgggggcaatctgtaatgctcatgttgttcatgctgatttgagtgaacatggggctttg gatgaaaactgcataaaactggcagaattggcggccacagctgttgacttccccaagact ggcaaacttgtaactatgccgccatacctaaaacccaaaatgtatccggattttatgggg aaggaggagtatcaatcatacaagtcaaccaaaattttgggaagactctatcgccagatt atagatgcttatggtgatgatgatgcagctgcattttctgagcttaattgtctatctggt gatatcccttatgatgctgatctggaggttttgggatctgctgattacattcttgaagcc tgggatcaaaagtgctcatatgatggacagctgaaaggtcttctgggacagtataaagtg aaaagagaagaggagttggttactggtcacatttggtccatgccgatgtccaatagcagg aagcaaggagatcttaaagagaggcttaagcattcttatagtgcactgaagaaagaattt aggcaagtttttgagggaatgaatttggatgttgagcaactcacagatgatgagaaaaac ttgcaatacgagagaaaggcgtcggcatggtaccaggttgcttaccatcccaaatggata aagaagtcactggagttgcaagagtctgatgctcctggcaatgcaacaatgttgagcttt tcttggattgcagctgattaccttgctcgaattaagattaagcgtaggggcactgaaggt attgacactgctaagccagtcaactcactggtgaaataccttactgatcggatctgctga

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