Jatropha curcas (Barbados nut): 105637986
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Entry
105637986 CDS
T03922
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105637986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105637986
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105637986
mRNA degradation factors
5'-3' decay
Lsm complex
105637986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
105637986
NCBI-ProteinID:
XP_012077075
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAGPDDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACDRVIVGDL
YCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTRVSVAEIKRAQKAEREATDLKGSMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggctggcccagatgatatttttctctccacttcgcttgctagctatcttgac
aaaaagcttctcgtcttgctgcgagatggtcgtaaactgttggggatactgagatctttt
gaccaatttgctaatgtggttcttgaaggtgcttgtgaccgagtaatagttggagacctt
tattgtgacatccccttaggtctatatgtaattcgtggagagaatgttgtcttaattgga
gaactggacttggagaaggaggagcttccctctcatatgacccgtgtgtcagtagcagag
attaaaagggctcaaaaggcagagagggaggctactgatctaaagggctccatgagaaaa
agaatggagttccttgactttgattaa
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