Jatropha curcas (Barbados nut): 105638043
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Entry
105638043 CDS
T03922
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105638043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105638043
03036 Chromosome and associated proteins [BR:
jcu03036
]
105638043
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105638043
Coactivators
SAGA/TFTC/STAGA complex
105638043
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105638043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
105638043
NCBI-ProteinID:
XP_037491613
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVDAFQAALNRDIVGDASTSQPSDSDTAVLSCEIKQSPS
QPFLDWQTTSQGENASGPSQQQQQQEQHISVTEIKQHGSAAENQQLQNNVRQMSSHLSLH
QKELQDDVQQGQTQQMSIQTPQLTGMEISERNSMSLPELEKMQNLDTGSQYLKIKKMVTQ
QATATEQPGNLKNQVKPIPFMLLLPTLNSHLDKDREMQLQTLFNKMRKNEIKNEQFVRLM
RSIAGEQVFKLALEQVQLQMQSQAFAHQSITRTPGASASSAVQVHADYPSAEKSVQKPRE
VYCQPDSHGMQTSSSSSASIVNQDRERPSIPVPGHRKQQQHLHFPQSSFLMHGNNTATYH
PYSGANVYTSGSPMKQQPHDLQIRKSSHQTMGAIRMGGSTHTMNIMNMPKFERKNSITDP
SRLQKGSISQYTNKSALQQSSVPWQAPTNKQVLVEQATEQPYKSQLSNPQSLSATLVDQG
NAVPGNMKDESLEKHPSKVGFSPPTSMVPSNSVSPSIANKLDPNVPVGSQIPSVASSAGV
NAKTPPKKPSVAQKKPLEALDSSPPVSSKKQKVSGQFSDQSIEQLNDVTAVSGVNLREEE
EQLFSGSKEDCRVSETSRMVVQEEEERLILQKIPLKKRLAEIMSRYRLKNINDDAERCLS
LVRCALRKECGD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcaataatgaagctcctcgaagaagatgaggacgaaacaatgcattccggt
gctgacgttgatgcattccaggctgccttgaatcgggatattgtaggtgatgcatccact
tctcagccgtctgattcggatacagcagttttgtcatgtgaaatcaaacaaagtcccagt
caaccatttctggattggcaaaccacgtcacaaggagaaaatgccagtggtccaagtcag
caacaacaacagcaagagcagcacatatctgtaacggagataaagcagcatgggtctgct
gctgagaatcaacaactacagaataatgtcagacagatgtctagtcacctatcgttacat
cagaaagagctccaagatgatgttcagcaggggcaaacacaacaaatgtctattcagacc
cctcaactaactgggatggagatttctgagagaaattctatgtcattacctgagttagaa
aaaatgcaaaatctagatactgggtctcaatacttgaagataaagaagatggttactcaa
caggccacagctacagagcaacctggcaacctaaagaatcaagtcaagccgataccattt
atgctattgcttcctaccttaaattcgcatcttgataaggacagagaaatgcagcttcag
actctgtttaataaaatgaggaaaaatgaaatcaagaacgaacaatttgtcaggcttatg
agaagtattgcaggggaacaagtgtttaagttggcattagaacaggtgcagttgcagatg
caatctcaagcttttgcacaccaatccattacgagaacacctggtgccagtgcctcttct
gcagttcaagttcatgctgattatccatctgcagaaaaaagtgttcagaaaccccgagag
gtatattgtcagccagattctcatggaatgcagaccagctcttcctccagtgctagcata
gtcaatcaggatagggagcgcccctcaattccagtgccaggacatagaaagcagcagcaa
catttgcactttccacagagttcctttctaatgcatggaaataatactgctacttatcac
ccatattctggagcaaatgtctatacttcaggatctccaatgaaacaacaacctcatgat
ttacaaatacggaaaagttcacatcaaaccatgggtgcaattcgaatgggaggttcaacc
cacacaatgaacattatgaatatgccaaaatttgagaggaaaaactctattacagatccc
agcagactacagaagggttctatttcccaatatacaaacaaatcggcactgcagcaaagc
tcagttccatggcaagcgccaacaaataaacaagtactggttgaacaggctaccgagcag
ccatataagtcccagttgtctaaccctcagagtttgtctgccaccctcgttgatcagggg
aatgcggtaccaggaaatatgaaggatgagtctttagagaagcacccttctaaagttggt
ttctccccacctactagtatggtgccctcaaattcagtttctccttccattgcaaataaa
ctggaccctaatgtcccggtaggttctcagatcccatctgtagcttcttctgctggagta
aatgcgaaaacacctccaaagaaaccatcagttgcccaaaagaagccacttgaagcactt
gattcttctccacctgtttcaagtaagaagcaaaaagtatcagggcagttttcagatcaa
agcattgaacagctcaatgatgtcactgctgtcagtggagttaatctaagggaagaggaa
gaacagttattttctgggtccaaggaggattgtcgagtttcagaaacatctcggatggtt
gtgcaagaagaagaggaaagactgattttgcagaaaattccactcaagaaaagattggcg
gagatcatgagcagatatagattgaagaatatcaatgatgatgcagagcgatgcttgtct
ttggtgagatgtgcgttgaggaaagaatgcggggactaa
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