KEGG   Jatropha curcas (Barbados nut): 105638280
Entry
105638280         CDS       T03922                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
jcu  Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jcu03400]
    105638280
Enzymes [BR:jcu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105638280
DNA repair and recombination proteins [BR:jcu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    105638280
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc HHH_5
Other DBs
NCBI-GeneID: 105638280
NCBI-ProteinID: XP_020536580
LinkDB
Position
Unknown
AA seq 2169 aa
MASDSPRTRIDQFFASKKRKTLSPGLKHVRIEKDARIAAEGSPSGKGTLDNYLVNSQEQS
NDTKLSYTVRGLLVRQDGVKRNLVLEMDKISEDESKDPILLAKIDTQTGEGFETIQKETS
GGSSNVGDVAVGGLTKDCSVLSYSAKNSELKQFANDKDPELKQFANDFLSLYCSELRSTA
TSPSKLNLNDHKRHSSQSFVDGEDKTSKKRHCITSKSCSEVNTDFSIEKKAVNPAGGVIF
GNDPTQLEASLRKCNRISKQTVDMIGCVTPGSSIVRTCVSQTPRSTRGSSMFSPGEAFWN
EAIQIADGLFAEPGNHLAVSAEDITNGSCGDKREILDKASIRGWQMGDVGSLELNGLHTR
DSIKEVSPLPVKHLHFLFEDKNLDASSLSNNIDDSNVHKGAEQSECGSVNIKSSQSGKIS
TYNKAQTKEEIQQSASVHGVTKREANLSNQDTDSITSNSPVNEIRKFVPNIGDYEAGTPC
TVVLLKDRLNLGDWLPPEICTIYKRKGILKLYPWQVDCLQVDGVLERRNLVYCASTSAGK
SFVAEILMLRRVISTGKIALLVLPYVSICAEKAEHLESLLEPLGRHVRSYYGNQGGGTLP
KDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVADQSRGYLLELMLTKLRYAS
GEGNSESSSGESSGTSSKGDAAHGMQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEE
FIKVGNTIYDKKMDIVRTIPRASDLGGKDPDHIVELCNEVVQEGHSVLIFCSSRKGCEST
AKHVSKFLKKFSVNVQNDSDFLDIASAIDALRRSPVGLDPTLEETLPSGVAYHHAGLTVE
EREIIESCYRRGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGR
TGIDTKGESILICKPEELKRIIGLLNESCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAN
DIHRYVRCTLLNSTKPFRDVVKSAQDSLRWLCHRKFLEWSEETKLYSTTPLGRAAFGSSL
CPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVEVEPDWELYYERFMELSPLDKSVG
NRVGVSEPFLMRMAHGAPMRTVNRPSNMKGFNGKLETRCGSANDSMISDEQSLRVCKRFY
VALILSRLVQETPVAEVCEAFKVVRGMVQALQENSGRFASMVSLFCERLGWHDMEGLVAK
FQNRVSFGVRAEIAELTTIPYVKGSRARALYKAGLRTHLAIAEASISELVKALFESTSWA
AQGSAQRRVQLGVAKKIKNGARKIVFDKAEEARVAAFSAFKSLGLNVPQFSQPLLSNASI
NVGEQSAVSNLSGDGTADVFLCVEQRDHASSDMCINGSRNSAKVTLRSEAEKPMKTIDVG
LVAPAEMKSNCLVQHNVDAESSAVPIEKTMTLSSKLDITGNRNANAIAALSVKLVHDDGD
GIGDRLIHSTVREQCSRENLCSDNMVSACEKSPINASNTPGGFDSFLALWDSAKEFYFDL
HYSRRSELNNITRFACFEIHGMAICWESSPVYYVNLPKDLLWSDNQRNILPPENWLEIVR
NRWNQISEIMGKRGVKKFSWNLKIQVQVLKNAIVSIQRFGCLNLSGKSSDIELIDSSHLL
LSPINVKEAIDMCVVAWILWPDEERSSNPNLEKEVKRRLPSEAVAAANRIGRWKNQMRRA
AHNGCCRRVAQTRALCSVLWKLLISEGLVEPLKNIEIPMVNVLADMELWGIGVDMEGCLK
ARNVLGKKLRHLEKKAYELAGMKFSLYTAADIANVLYGHLKLPIPEGHGKGKLHPSTDKH
CLDLLRNEHPIIPVIREHRTLAKLLNCTLGSICSRATLSMRTQKYTLHGHWLQTSTATGR
LSIEEPNLQCVEHMVEFRMMDENGSGEDGNLYIINARDFFVPTQDNWLLLTADYSQIELR
LMAHFSKDASLIELLTKPNGDVFTMMAARWTGKPEDSVASGERDQTKRLVYGILYGMGAN
TLAEQLDCSSDEATEKIKSFKSSFPGVASWLQEAVSSCRKNGYVETLKGRKRFLSKIKFG
NSKEKSKAQRQAVNSICQGSAADIIKIAMINIYSVIIGADGPDSSSSFAAKFHMLKGRCR
ILLQVHDELVLEVDPPVIKEAASLLQISMESAASLLVPLQVKLKVGRTWGCLEPFQVDQY
TNEVLAFDS
NT seq 6510 nt   +upstreamnt  +downstreamnt
atggcgtctgattcgcctcggactcggatcgatcagttttttgcttcgaaaaagaggaaa
actctatcgcctggtttgaagcatgtgagaattgaaaaagatgcaagaatagctgccgaa
gggtctcctagtgggaaaggtacattggacaattacttggtcaattcacaggagcaaagc
aatgataccaagctttcatatacagttcgcggtttattggtcagacaagatggagtcaag
agaaatctggtgttggagatggataaaatctccgaagatgaaagtaaagatccaattttg
ttagctaaaattgacactcaaaccggtgaaggatttgaaaccattcaaaaggaaacatcg
ggaggctcatcaaatgtgggtgatgttgccgttggaggccttacaaaagattgctcagtt
ttgagttacagtgccaaaaactcagaactaaaacagtttgcaaatgacaaagacccagaa
ctaaaacagttcgcaaatgactttttgtctttgtactgtagtgaactacggtcaactgca
acttcaccgtctaagctaaatttgaatgaccataagagacatagtagtcaatcgtttgtg
gatggtgaggataaaacatcaaagaagaggcattgcataaccagcaagtcatgttcagaa
gtcaacactgatttctccatcgagaagaaggcagttaatccagctggaggggtcattttt
ggtaatgatcccactcagcttgaagcaagcttgagaaaatgtaacagaatttctaaacaa
actgttgatatgattggatgcgttacaccaggctcgtcaattgttagaacatgtgttagt
caaaccccgaggtcaacgcgtggaagctccatgttttcgccaggagaagcattctggaat
gaagcaattcaaatagctgatggtttgtttgctgaacctggtaatcatcttgcagtgtct
gctgaagatattaccaacggaagttgtggggacaaaagggaaattttggacaaagcaagc
atcagaggctggcagatgggggatgttggttccttggagttaaatggtttgcatacgaga
gattcaattaaagaagtgtctccattgcctgtcaaacatcttcactttttgtttgaggac
aagaacttggacgcaagttccctgtccaataacatagatgattcaaatgtgcataagggt
gctgagcaatctgaatgtggttctgtaaacattaaaagctcacaaagtggcaaaatctca
acttacaataaagctcaaacaaaggaagaaatccaacagtctgcatctgttcatggagtg
accaaaagggaagcaaatttgtcaaatcaagatactgatagcattacatctaattcacca
gtcaatgaaatcaggaagtttgttcctaatattggagattatgaagctgggactccttgc
accgttgtgcttctcaaagacagattaaatcttggcgattggcttccgccagaaatatgc
accatatacaaaagaaaaggaattttgaaactatacccttggcaggttgactgtcttcag
gtagatggagttttagagagaaggaatcttgtatactgtgcatctacaagtgctgggaaa
agttttgttgcagaaattttgatgctgcggcgggtcatatcaaccggcaaaattgcactt
cttgtacttccttatgtatcaatttgtgcagaaaaggctgaacatctggaaagccttttg
gaacctcttggtagacacgtgcgaagttattatggaaatcaaggtggtggaactcttcct
aaggatacttctgttgctgtctgcacgatagagaaagcaaactctttaataaacaggtta
ctggaagaaggtcgtttatcagaaattggaatcattgtgatagatgaactgcacatggtt
gccgatcaaagcagaggttatcttttggaacttatgttgaccaagcttcgatatgcttct
ggtgaaggcaattcagaatctagcagtggagaaagctcaggtactagcagtaagggtgat
gctgctcatggtatgcaaattgttgggatgagtgcaaccatgccaaatgttgcagcagtt
gctgattggcttcaagcagcattatatcagacagaatttcgacctgttccactagaggag
ttcattaaagttggcaatactatttatgacaagaaaatggacattgttagaacaattcca
agagcatctgacctaggtggtaaagatcctgatcatattgtggaactatgcaatgaggtt
gttcaagaaggtcattcagtgttaatattctgctctagtcgaaaaggatgtgaatcaact
gccaagcacgtttccaagttcctgaagaagttttctgttaatgttcagaatgatagcgat
tttcttgatattgcttcagctattgatgcattgagacgatctcctgtgggattggatcct
acattagaagaaactcttccttctggtgtagcttatcaccatgctggcctcactgttgag
gaaagagaaattattgaaagttgctatcgcagaggccttgttcgtgtcttaactgctaca
tctaccttagctgctggggttaaccttcctgctaggagggtcatttttcgacaacctaga
attggtcgtgattttattgatgggacaaggtacagacagatggctggtcgggctggtcgg
accgggatcgatactaaaggcgaaagtatactgatttgcaaaccagaagaactaaaaaga
attatagggttgctcaatgaaagctgtccaccattgcagtcttgtctctctgaagataaa
aatggaatgactcatgcaattttagaagttgtggctggtggaattgttcaaactgctaat
gatattcatcgatatgttagatgcactcttctcaattctacaaaaccatttagagatgtc
gtcaaatcagcacaggattctctcaggtggttgtgtcacagaaaatttcttgaatggagt
gaagagacaaagttatatagcaccacaccacttggccgtgcagcttttggcagttctctt
tgtccagaagaatcactaattgtgctagatgacctttccagagcaagagaaggatttgtg
cttgcatctgacttgcacctggtgtacttggtcactccaatcaatgttgaagttgagcca
gattgggaactgtattatgaaaggttcatggagttatctcctcttgacaagtctgttgga
aatcgagttggagtttcagaaccatttttgatgcgtatggcacatggagcacctatgcgt
acagtgaacagacctagtaatatgaaagggttcaatggaaagttagaaactcgatgtggg
agtgcaaacgacagtatgatttcagatgagcagtcacttcgagtatgcaaacgattttat
gtggctcttatcctgtcaagactagtgcaggaaacgcctgttgctgaggtttgtgaagct
tttaaggttgtgagaggcatggttcaagccttacaagaaaattctggaagatttgcatct
atggtttctttgttttgtgaacgacttggatggcatgatatggaaggtttggtggccaag
ttccaaaaccgcgtttcatttggagtgagggcagagattgcggagcttaccactattcca
tatgttaagggttctcgagcaagagcactatataaagcaggcttgcgaacacatctcgca
attgctgaagcatctatttctgaattagttaaagctcttttcgaatccacatcatgggct
gcacaaggttcagcacaaaggcgagtgcaattgggagttgcaaagaaaataaagaatggt
gcaaggaaaattgtttttgataaagctgaagaggcaagggttgcagctttctcagctttc
aaatctcttggactcaatgtcccacagttttctcagccattattatcaaatgcttctata
aatgttggtgagcaaagtgctgttagtaacttatctggagatggcaccgctgatgttttt
ctttgtgttgaacaaagagaccatgcttcaagtgacatgtgcataaatggtagcaggaat
tctgctaaagttactttgagaagtgaagcagaaaagccaatgaaaacaatagatgttggt
ttagtggctccagcagaaatgaagtcaaattgtctagtgcagcataatgttgatgctgaa
agttctgctgtgccaattgagaagactatgaccctcagtagtaagctagatattactggt
aatcgaaatgcaaatgcaattgcagcgctatctgtaaagctggtacatgatgatggagat
ggtataggtgacaggcttattcacagtacggtacgtgaacaatgtagtagagaaaattta
tgcagtgacaacatggtaagcgcatgtgagaaaagccctattaatgcaagtaacactccg
ggtggatttgattctttcttggctctctgggactcagccaaagaattttattttgacctc
cattacagcagaaggtcagaactaaataacatcacacgattcgcatgttttgaaattcat
ggcatggccatctgttgggaaagctcccctgtgtactatgtcaatcttcctaaagatcta
ctatggtctgataaccaaagaaatattctgcctcctgagaattggttggagattgttagg
aataggtggaaccagattagtgaaataatggggaaaagaggggtcaaaaaattctcttgg
aatttgaaaattcaggttcaggtgctcaagaatgctattgtttccattcagagatttggt
tgcctgaatctttcagggaaaagttcggatattgaactcatagacagttcgcacttattg
ttgtccccgatcaatgttaaagaagcaatcgacatgtgtgttgtggcatggattctttgg
cctgatgaggagagaagctctaacccaaacttggagaaggaagtcaagagaaggttaccc
agtgaggctgttgcagctgctaatcggattggcaggtggaagaatcagatgcgcagagct
gctcataatggttgctgtcgtcgggttgcacaaacacgggctttatgttcagttctttgg
aagttacttatttctgagggacttgttgaaccacttaagaacattgagattccaatggtt
aatgttcttgcagacatggagctttgggggataggtgtcgacatggaggggtgccttaaa
gctcgtaatgtgttgggaaaaaagctaaggcatcttgagaagaaggcatatgagctggct
ggcatgaaattttcattgtatacagcagcagatattgcaaatgtgttgtatggacacttg
aagctgcctataccagaaggtcatggtaaagggaaactacatccaagtactgacaaacat
tgtttggatttgttaagaaatgagcatcctattattccagtcattagagaacaccggaca
ttggcaaaacttttgaactgtactctgggctcaatctgttcacgggctacgctatctatg
aggacgcagaagtacacactacatggccattggctccagacatctactgcaactggacga
ctgtcaatagaagaacctaatcttcagtgtgttgaacatatggttgaattcagaatgatg
gatgaaaatggaagtggtgaagatggaaatctttatataataaatgctcgtgacttcttt
gttcctacgcaggacaattggttgctattaacagcagattattctcagatagagttgcgt
ctaatggcacacttctctaaagatgcctcattaattgaactccttactaagccgaatggt
gatgtttttaccatgatggcagcaagatggactgggaagcctgaagattctgttgcatct
ggtgagcgagatcagacaaaaagattggtatacggcattctttatggaatgggtgccaat
actcttgcagaacaattggattgcagttcagatgaagctactgagaaaattaaaagcttc
aaaagttcttttcctggtgttgcttcctggctccaggaagctgtctcatcctgccgtaaa
aatggttatgtggagaccctcaagggaagaaagcgattcttgtcaaaaataaaatttggt
aacagtaaagaaaaatcaaaagctcagagacaagctgttaattctatatgtcagggatct
gctgctgatataataaagattgcaatgataaatatatactctgtgattattggtgctgat
ggcccagattctagctcttcgtttgcagctaagtttcacatgctgaagggccggtgccga
attcttttgcaggtacatgatgaattagtcttggaagttgatccccctgtgatcaaggaa
gctgcatcattgttgcaaataagcatggaaagtgctgcatcacttcttgtccctttgcaa
gtcaaactaaaagttggaagaacatggggatgtttggagcctttccaggttgatcaatat
acaaatgaggttcttgcctttgattcgtag

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