KEGG   Jatropha curcas (Barbados nut): 105638312
Entry
105638312         CDS       T03922                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like protein isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105638312
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:jcu03036]
    105638312
   03400 DNA repair and recombination proteins [BR:jcu03400]
    105638312
Chromosome and associated proteins [BR:jcu03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    105638312
DNA repair and recombination proteins [BR:jcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     105638312
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 105638312
NCBI-ProteinID: XP_012077528
LinkDB
Position
Unknown
AA seq 583 aa
MIERKKKRARKKESYFETVKDVESTHEEKVRVSPYFQTQKPEIDSISNSALQDWNGEKGK
KKKKKKKKKNKRLISSTFVENDTIAPVLLGKKPENFVNAEDREKIKRRKRDNGPIQSDGD
RDLGMKEQVNAAPNTIKSFEDMLAKFVYRGGVVRDKKIPKPRVCSPYFVKVEKNVERKKE
GDNNMKKEVKGMAAIIDGNLESQVLEIGDISTTGRPTEIETHAQQQVGINERELMKIKPL
KPCGRAGRAAKNISPYFQKVPKEEEDVDNRTDNEYRPKKSSKKCKNASVGADPTVGYVSP
YFHKIPRKEEAIDNNHEQRKTSRKRKTGATIQNVSPYFKKVSNEQEAEASSLIDGKRKRK
KSSKKNKEEPCEIAGPTVRNVSPYFHKEEAADSNNGQKQSSKGRKRSARTSIVLTASEKR
SEAYLRKTPDNTWKPPQSEHGLLQENHAHDPWRVLVICMLLNCTTGTQVNQNNFVLHKVR
RVIEDLFTLCPSAEAAINVMKEEIERIIEPLGLQKKRAVMIQRMSQEYLEDHWTHVTQLH
GVGKYAADAYAIFCTGKWDQVRPADHMLNYYWEFLGRINNASS
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgattgaaaggaagaagaaaagagccagaaagaaggagagttattttgagactgtaaaa
gatgtagaaagtacgcatgaagagaaagttagggtttctccttattttcagactcagaaa
ccggaaattgacagtatttctaattctgctcttcaagattggaatggggaaaaggggaaa
aagaagaagaagaagaagaagaagaagaataagagactcatttcttcgacttttgttgaa
aatgatacaattgcccctgttcttcttggaaagaaaccagagaattttgttaatgcggaa
gacagggagaagataaagaggaggaaaagggacaatggtcctattcagtcagacggggat
agggatttggggatgaaagaacaagtaaatgcggctcctaatacgataaagagtttcgaa
gacatgcttgcgaaatttgtatacagaggaggcgttgttagggacaagaagattccaaag
ccacgagtttgctctccctattttgtaaaagttgagaaaaatgtggagagaaagaaagag
ggtgacaataacatgaagaaggaagtaaagggcatggctgctataattgatggaaacttg
gaaagtcaagtgttagaaattggggatatatcaaccaccgggagaccaacggagattgaa
acacatgcacagcagcaagtcggaatcaatgagagagagctaatgaaaatcaaacctctg
aaaccatgtggaagagctggtcgtgcagctaaaaatatttccccctacttccagaaggta
cccaaggaagaagaagatgtggataacaggactgacaatgaatataggccgaaaaaatca
tcaaagaagtgcaaaaatgcatctgtaggtgctgatcccactgttggatatgtctccccc
tactttcataagatacccagaaaggaagaagctatagacaacaaccacgagcagaggaag
acatcaaggaagagaaaaactggtgctacaattcaaaatgtgtcgccatacttcaagaag
gtatccaatgaacaagaagctgaagctagcagcttgattgacggcaaacgtaagcggaaa
aagtcatcaaagaaaaacaaagaagaaccatgtgaaatagctggtcctacagttcgaaat
gtctccccctatttccacaaggaagaagcagcagatagtaacaatgggcaaaaacagtca
tcaaagggaagaaaaagatcagctaggaccagcattgttctaactgcttccgaaaagaga
agcgaagcttatctaaggaaaacaccagataacacatggaagccacctcaatctgaacat
gggcttctgcaagagaatcatgcacatgatccctggagagtgttggtgatatgcatgctc
cttaattgcacgactggtacacaggtgaaccagaataattttgtcctccataaggttcgg
agagttatagaagatctcttcactttatgtcccagtgcagaggctgccattaacgtcatg
aaagaggagattgaaagaataatagaacctctgggcttgcagaagaagagggcagtgatg
atacaacgcatgtctcaggagtatttggaagatcactggacccatgttacccagctgcat
ggcgtgggaaagtatgctgctgatgcgtatgcaatattctgtacggggaagtgggatcag
gtgcgtcccgctgatcacatgctaaattattactgggagtttctaggtagaatcaacaat
gcttcatcgtag

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