KEGG   Jatropha curcas (Barbados nut): 105638604
Entry
105638604         CDS       T03922                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    105638604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jcu03400]
    105638604
DNA repair and recombination proteins [BR:jcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      105638604
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 105638604
NCBI-ProteinID: XP_012077823
LinkDB
Position
Unknown
AA seq 909 aa
MRRGPSFSLLSILFRKENAMDTGKESLAEMSIDAVDKLVRRVNGRRSSGAGGNGKQRVDD
TRVTWNDLDNSIDGGSLKDSLRNSEGEAETDDIDWEDGSTPIKDSLNNDNHVGDDVSRTV
TIEFSESPDSAKRKPIRRATAEEKELAELVHKVHLLCLLARGRIVDSACDDPLIQASLLS
LLPAHLLKIPEVSKLSANSLSPVVSWFHNNFRIRSSTSEKRSFQSALAFALETREGTPEE
IAALSVALFRALKLTTRFVSILDVASIKPEADRCESSSQDTSRVKRGIFNSSTLMVDRSE
QVLESPVKSFSCNENNTIHETSLKASFKRKDSHPRSNKTHSNDCPTAVRLENQVTDSFSC
EAQDKISESCISTKSQGSKRKGDLEFEMQLQMALSATATANPQISMTSDVSSLISDSSNI
SSPVKRIKTVASEQSSSHGISTAVGSRKVGSPLYWAEIYCSRENLTGKWVHVDAVNAIVD
GEQKVEAAAAACKTSLRYVVAFAGHGAKDVTRRYCMKWYKIALQRINSVWWDSVLTPLRD
LESGATGGSLEVSEVPERKIDAQPSGRNSFVASRNSLEDVELETRALTEPLPTNQQAYKN
HQLYAIERWLTKSQILHPRGPVLGFCSGHPVYPRACVQTLKTKERWLRDGLQVKAQELPA
KVLKQSGKLKKVKSSEDDEYGEADPKGTTELYGKWQLEPLQLPRAVNGIVPKNERGQVDV
WSEKCLPPGTVHLRLPRIFHVAKRLEIDYAPAMVGFEFKNGRSIPVFEGIVVCTEFKDAI
LQAYAEEEERREAAEKKRIEAEALTRWYQLLSSIITRQRLNNCYMNNSSSQMPSNIQDTN
NAYVNSKTDKQSQELRGEDMRKPISLASQLVLTKDHEHVFLAVDQSFDEETSVRTKRCSC
GFSVQVEEL
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgcgtagaggtccttccttttcactcctctctattctattcaggaaggagaatgcgatg
gacactggaaaagaaagtctggccgaaatgtcaattgacgcagtagacaaacttgtcaga
cgtgtcaatgggcgtaggtcatcaggggcaggaggaaatggcaaacagcgagttgatgat
acaagagttacatggaatgatttggataattccattgatggagggagtttgaaggattct
ttaagaaatagtgaaggagaagctgaaacagatgatattgattgggaagatggttctact
ccaattaaggattctttgaataatgataatcatgttggtgatgatgtatctaggacggtg
actattgagtttagtgagtctcctgattctgcaaaacggaagcctattcgtcgcgccact
gctgaagaaaaggaattggcagagcttgtgcataaggttcacttactttgtttacttgct
aggggcagaatagttgatagtgcttgtgatgatcctcttatccaggcttctttactctct
ctactaccagcacacttgttgaagataccagaggtctcaaaacttagcgctaattcttta
tctcctgttgtcagttggtttcataataactttcgtattagaagctctaccagtgagaag
agatcatttcagtcagctttggcctttgcacttgaaactcgtgaaggaactccagaagag
attgcagcattgtctgtggcactattcagagctttgaaacttaccacgcggtttgtgtcc
attctagatgttgcctccataaaacctgaagctgacagatgtgaatcctcaagtcaagat
acaagcagagtgaaaagagggatatttaatagttcgacattgatggtagatagatcagaa
caggtccttgagtctcctgttaaatcattctcatgcaatgagaataacaccatccatgaa
acttctctaaaggcttctttcaaacgtaaagatagtcatccaaggagcaataagactcat
tctaatgattgtcctactgcagtcagattggaaaaccaagtgacagattcattttcatgt
gaggcgcaggataagatctctgaatcatgcattagcacaaaatctcagggttcaaagagg
aaaggtgatcttgagtttgagatgcagttgcaaatggctctctccgcaacagcaactgct
aatcctcaaattagcatgacatcagatgtgagcagcttgattagtgattcatcgaatatc
tcttctccagttaaaagaattaaaacagttgcaagcgaacaatcttcttcccatggaatc
tccactgcagttggatcaaggaaagtgggatctcctctgtattgggcagaaatatactgc
agtagagaaaacttaacaggaaaatgggtgcatgtggatgctgtaaatgcaattgtagat
ggagaacagaaagttgaagctgcagcagctgcatgtaaaacatctttgcgatatgtggtt
gcatttgctggccatggtgctaaagatgtgacacgcaggtactgtatgaagtggtacaag
atagcactacagcgaattaactcagtttggtgggattcagtgttaaccccattgagggat
ttggagtcaggagcaactggaggctccttggaagtgtctgaagtacctgagaggaagatt
gatgcacaaccttctggaaggaactcctttgttgctagtagaaactctcttgaggatgtg
gagttggaaactagggctctaactgagcctcttcccactaatcagcaggcctataaaaat
catcaattatatgctattgaaagatggcttacaaagtctcagatacttcatcccaggggc
cctgttttgggtttttgttctgggcatccagtttaccctcgtgcttgtgtgcaaacactc
aaaacaaaagaaagatggttgcgtgacgggcttcaggttaaagcccaagaacttccagca
aaggtgttgaaacaatctggaaagcttaagaaagtaaaatcttcagaagatgatgaatat
ggtgaagctgatcctaaaggaactacagagttatatgggaagtggcaactagaaccctta
cagctgccccgggctgtgaatgggatcgttccaaagaatgagcgtggtcaagttgatgtg
tggtctgagaagtgcttgccaccagggaccgttcacttgagactgccaaggatatttcat
gttgccaagagattagaaattgactatgcaccagccatggttggttttgaattcaaaaat
ggtcgatctattcctgtctttgaaggtattgtggtgtgcactgagttcaaggatgcaatt
ttacaggcatatgctgaagaagaagagagaagagaagctgcagagaagaaaagaatcgag
gcggaagctcttactcggtggtatcaactcctttcatcgatcataactcgacaaaggtta
aacaactgttacatgaataattcatcatcacaaatgccaagcaacatccaagatacaaac
aacgcatatgttaatagtaaaaccgacaagcaatcgcaggaacttcggggagaagacatg
agaaagcctatatcacttgcttcacaactggttctaacaaaagatcatgaacatgtattt
ttggcagtagaccagagctttgatgaggagacttcagtgaggacaaaacggtgttcttgt
ggattttcagtccaagtggaggaattatag

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