Jatropha curcas (Barbados nut): 105638619
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Entry
105638619 CDS
T03922
Name
(RefSeq) LOW QUALITY PROTEIN: polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Module
jcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105638619
Enzymes [BR:
jcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105638619
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
105638619
NCBI-ProteinID:
XP_037495928
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All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MANFIHALVFLSFASYNFWLATARGAHYNVVNYGAKPDGRTDSSNAFLAAWKEACAFAGS
IEIYVPKGRFAISKAVAFTGPCKNNATLFRIDGTLLAPSDYEVIGNSGTWIIFQQVTGVR
IVGGVLDGQGAGLWSCKTSGKNCPTGATSLEFTNSNNIGIRRLVSLNSQMFHIVINECQN
VNVKGVKIIAPGNSPNTDGIHVGGSTHVNIFKTKIGTGDDCVSIGPATSNLWVENVICGP
GHGISIGSLGRDLEENGVQNVTVRSSTIVGTQNGVRIKTWGRESNGFARNIHFQNTWFTK
VVPGHVSFXIKTKLVSFNHILYFFXNSIFVGQNSISDVTYQDIRGSSATDIAMKFDCSKK
YPCQGIKLQDVKLSCKNQQSRALCAHAAGIASGFVEPKSCL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattttattcatgcacttgtttttctttcctttgcctcgtataatttctggtta
gccacggcaaggggcgcacactacaatgtagtaaattacggtgcaaaaccagacggcagg
acagattcgagcaacgcctttcttgcggcttggaaagaagcatgtgcctttgcaggatca
atcgaaatttatgttcctaaagggagatttgccataagcaaggcagtagcattcacgggt
ccttgcaagaacaatgctactttgtttcgcattgatggtacacttttggctccttcagat
tatgaagtgattggtaattcagggacttggataatttttcaacaagttactggtgttaga
atcgttggtggggttcttgatggacaaggcgccggattgtggtcttgtaaaacctcaggc
aagaactgtcctactggtgcaacgtcacttgaatttacaaattcaaacaacattggaata
agaagattggtatcactaaatagccaaatgttccacattgtgatcaacgaatgccaaaat
gtcaatgtgaaaggagtgaaaattatagctcccggcaatagccctaacacagatggaatt
cacgttggaggatcaacccatgtcaacattttcaaaactaaaattggaactggggatgac
tgtgtatcaattggtcctgccacttctaatttgtgggttgaaaatgttatatgtggacct
ggccatggaatcagcataggaagtttagggagggatcttgaagaaaatggagtgcagaac
gtgacggttagatctagtacaattgttggtacccagaatggagtgagaatcaagacttgg
gggagagaaagcaatggttttgcaaggaacattcatttccaaaacacctggtttaccaag
gttgttcctggtcatgtaagcttctaaattaagacaaagctcgtttcttttaatcatatt
ctctattttttctgaaattcaatttttgttggacagaattctattagtgatgtcacctac
caagacatacgaggatcatcagcaactgatatagcaatgaaatttgattgcagtaaaaaa
tatccatgtcaagggattaaattacaagatgtgaagctgagttgcaagaatcaacaaagt
cgagcattatgtgctcatgctgctggaattgcttctggttttgttgagcctaaaagttgt
ttgtag
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