Jatropha curcas (Barbados nut): 105638688
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Entry
105638688 CDS
T03922
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105638688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105638688
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105638688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_SPT8
NBCH_WD40
WD40_like
Beta-prop_SCAP
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_LRRK2
WDCP
Beta-prop_IP5PC_F
Utp12
VID27
VPS8_N
Motif
Other DBs
NCBI-GeneID:
105638688
NCBI-ProteinID:
XP_012077918
UniProt:
A0A067LEM6
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MGIFEPYRAIGYITSTVPFSVQRLGTETFVTVSVGKAFQVYNCAKLNLVLISPQLPKKIR
ALASYRDFTFVAYGNDIAVFKRAHQVATWSRHSSKVNLLLLFGDHILSVDVDGNIFIWAF
KGIEQNLAPTGHIMLDNKFTPTCLMHPDTYLNKVVVGSREGSLQLWNISTKKKLYEFKGW
NSSITSCVSSPALDVIAVGCADGKIHVHNIRCDEELVTFSNSTRGAVTALCFSTDGQPLL
ASGGSSGVISIWNLEKRRLQSVIREAHDNSIISLHFFANEPVLMSASADNSIKMWIFDTS
DGDPRLLRFRSGHSAPPHCIRFYANGRHILSAGQDRAFRLFSIIQDQQSRELSQRHVSKR
AKKLRVKEEELKLRPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPC
PENPNPVKACAISACGNFAVVGTAGGWIERFNLQSGLSRGSFVDVSERGSCAHEGEVVGL
ACDSTNTLMISAGYHGDVKVWDFKGRGLKSRWEIGCTLVKTVYHRLNGLLATVADDLVIR
LFDVVALRMVRKFEGHSDRVTDLCFSEDGKWLLSSSMDGTLRIWDVILARQIDAIRVDMP
ITALSLSPNLDILATTHVDQNGVYLWVNQSMFSGASSVDSYASGKDVVNVKLPSVFSIES
SQVQDSDKPIEKQLQQFGSFSSPAFIQQIPELVTLSLLPKSQWQGLINLDIIKIRNKPVE
PPKKPESAPFFLPSIPSLSGEILFKPSDPINVEKDAKADELENNHQKLDVPSSEFMQLLQ
SSVKTENFSAFTDYIKGLSPSTLDMELRMLQIIDEDDQQDLEKRPEFVSIELLLDYFIHE
ISSRNNFEFIQAVIRLFLKIHGETIRCQSKLQDRARKLLETQCAVWQRVDKLFQSARCMV
TFLSNSQF
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggggatatttgaaccctatagagcgattggatatataacaagcacagtgcctttctct
gtccagcgactagggactgaaactttcgtgacagtgagtgtaggcaaagcttttcaggtc
tataactgtgccaagctcaatttggtcctgattagccctcaacttcctaagaagattcga
gctcttgcctcatatcgtgatttcacctttgttgcttatggaaacgacattgctgttttt
aagcgcgctcatcaggtagcaacttggagcaggcatagttctaaagttaatttgttgttg
ctgtttggagatcatattctaagtgtagatgtcgatggtaatattttcatttgggctttt
aaaggaattgagcagaatcttgctcccactggacatatcatgctagataataagtttaca
cccacctgtttaatgcacccagatacttatctaaacaaggttgttgttgggagtagggag
ggttctttgcagctttggaatattagcactaagaaaaagctctacgagtttaaaggatgg
aattcctctattaccagttgtgtgtcatcgcctgcactagatgttattgcagtcggctgt
gctgatgggaagattcatgtacataatattcgctgtgatgaagagttggttaccttttct
aactcaacaagaggagcagtaactgccctgtgtttcagtactgatggacaacctcttcta
gcatctggaggttcatctggtgttataagcatatggaatcttgagaaaagaaggctccaa
tcagtcataagagaggcccacgataattcaataatttcattgcacttttttgctaatgag
cctgtgttgatgagcgcatcagcagacaactcaattaaaatgtggatttttgacactagt
gatggagatcctcgcttgttgcgcttccgaagtggacacagtgctcctccacattgcata
aggttctatgcaaatgggagacacattctatctgctgggcaggatcgtgctttccgtctc
ttctctatcatccaggatcagcaaagtagagagctttcccaacgccatgtatctaagcgg
gcaaagaaacttagggtgaaggaagaagagttgaaattgaggcctgttattgcatttgat
tgtgctgaaattagggagcgggattggtgcaatgtggttacatgtcatatggatactgca
caggcctatgtatggaggcttcaaaattttgttcttggtgagcatatcctcagaccttgc
ccagaaaatccgaatcctgtcaaggcctgtgccatcagtgcatgtggcaattttgctgtc
gtagggacagcaggcggttggatagaaaggttcaatcttcaatcagggcttagccgaggc
agtttcgtagatgtgtcagaaagaggaagctgtgcacatgagggagaagtagttggactt
gcttgtgattcgacaaataccctgatgataagtgcaggatatcacggtgatgtaaaggtt
tgggatttcaaaggacgtggactaaaatctagatgggaaattggttgtactctggttaag
actgtttatcatcgtcttaatggtcttttggctaccgtagcagatgatttagttatccgt
ttgtttgatgttgtggcattaagaatggttcgcaaatttgaaggccactctgaccgtgtt
acagatttatgttttagtgaggatgggaaatggcttttgtcatccagtatggatgggacc
cttagaatttgggatgtgattttggccaggcaaatagatgctatacgtgttgacatgcct
attactgcattgtctctatcaccaaatttagatatattggcgactacccatgttgatcaa
aatggtgtctatttatgggttaatcagtcaatgttctctggggcttcaagtgttgattct
tatgcaagtgggaaagatgttgtgaatgtaaaattgccatctgtcttctctatagaaagt
tctcaagttcaggactctgataagccgattgagaagcaattgcaacagtttggatctttc
agttcaccagcattcatccagcaaataccagaacttgtcactctctctttgttgcctaaa
agccaatggcagggcttgatcaacttggacattataaagatacgcaataagccagttgag
cctcctaagaaacctgaaagcgcaccttttttcttgccttcaattccatctctttctgga
gaaattttatttaaacctagtgacccaataaatgtggagaaagatgcaaaagctgatgag
ttggagaacaaccaccaaaaacttgatgtgccgtcatcagagtttatgcaactccttcag
tcctctgtgaagacagagaatttttcagcatttacagattatatcaaaggtttgtctcca
tcaactttggatatggaacttcgaatgctgcagataatagatgaagacgatcagcaagat
ctagaaaagagacctgaatttgtttcaattgaactgctgcttgattatttcatacatgag
atatctagcagaaacaattttgagttcatccaagctgttattagattatttttaaagatt
catggtgaaacgatacgatgccaatcaaaattacaagatagagctaggaagcttttagaa
actcaatgtgcagtttggcagagagtagataaattattccaaagtgctagatgcatggta
actttccttagcaactctcagttttaa
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integrated database retrieval system
