Jatropha curcas (Barbados nut): 105638721
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Entry
105638721 CDS
T03922
Name
(RefSeq) ubiquitin receptor RAD23d isoform X2
KO
K10839
UV excision repair protein RAD23
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03420
Nucleotide excision repair
jcu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105638721
09124 Replication and repair
03420 Nucleotide excision repair
105638721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
jcu03051
]
105638721
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105638721
Proteasome [BR:
jcu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
105638721
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105638721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_RAD5A
Dsc3_N
Ubiquitin_5
UBA_3
Motif
Other DBs
NCBI-GeneID:
105638721
NCBI-ProteinID:
XP_012077961
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MKVFVKTLKGTNFEIEVKPDDRTENNNNVNGEIQVADVKKAIETVQGADVYPAAKQMLIY
QGKVLKDDTTLEENKVAENSFIVIMLSKSKVSSGGTSAASTGPPSQAQPASSLPSHATQP
STTTEAPAPTPAPPPSAAESIPAVANPVSSESDVYGQAASNLVAGNNLEATIQQILDMGG
GSWTRETVVRALRAAYNNPERAVEYLYSGIPEQAEVQPVAQIPASAQAANTPAQAEQPAV
PTSGGPNANPLDLFPQGLPSMGSNASAGTLDFLRNSQQFQALRTMVQANPQILQPMLQEL
GKQNPHLMRLIQEHQADFLRLINEPVEGEGNVLGQLASAMPQAVTVTPEEREAIERLEAM
GFDRAIVLEVFFACNKNEELAANYLLDHMHEFEE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgttaagactttgaagggtactaacttcgaaatcgaagttaaacccgac
gataggactgagaacaacaataatgtcaatggtgaaattcaggttgccgatgtaaagaaa
gctatagagactgtacagggtgcagacgtataccctgctgcaaagcagatgctgatttat
caggggaaagttcttaaggatgacacaacactggaggaaaataaagttgctgaaaatagt
tttattgtcattatgttaagcaagagcaaggtttcatctggtggaacatcagctgcttca
actggacctccaagccaagcacaacctgcaagttctttgccttctcatgcaacacagcct
tcaacaactaccgaagctcctgctccaactccagcacctccaccttccgctgctgaatct
ataccagctgtagctaatcctgtttcttcagaatcagacgtgtatggacaagcagcatca
aatcttgttgcaggaaataatttagaggctactattcaacagatacttgatatgggtgga
ggaagttggacccgtgaaactgttgtgcgtgctttacgtgctgcatataacaaccctgaa
agggctgttgaatatctttactctggcatccctgagcaagctgaggttcaacctgttgcc
caaattcctgctagtgcacaggcagcaaatacaccagcccaggctgaacagccagcagta
cctactagtggtgggccgaatgcaaaccctctagatctatttccacagggccttcccagt
atgggttccaatgctagtgcaggcaccttggattttttgcgtaacagtcaacagttccaa
gcgttgcggaccatggtgcaagctaacccccaaatcctgcagcctatgcttcaggagctg
gggaagcaaaatccacatcttatgcggctcattcaagagcatcaagctgacttcttgcgc
ttgataaatgaaccggttgaaggagaggggaacgtccttggccagttggcctcagcaatg
cctcaggctgtgactgttacccctgaggagcgcgaagcaattgagcggcttgaagcaatg
ggctttgatcgtgcaatagtattggaggttttctttgcatgcaataagaatgaagaacta
gcagccaactatctattagatcacatgcatgagttcgaggaatga
DBGET
integrated database retrieval system
