Jatropha curcas (Barbados nut): 105638853
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Entry
105638853 CDS
T03922
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase isoform X1
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jcu03016
]
105638853
Enzymes [BR:
jcu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
105638853
Transfer RNA biogenesis [BR:
jcu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105638853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransf_23
MetW
Ubie_methyltran
Methyltransf_9
Methyltransf_4
Motif
Other DBs
NCBI-GeneID:
105638853
NCBI-ProteinID:
XP_012078118
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MVFNFSRVGRLSKTFLEAFTLSILAVGSVCHSQIFRNMRKIKVKGSSGLFSHAFDGESQI
QQSVSECEEQKCLSCSVQSTPEIERKYVHRVYDAIAPHFSSTRFAKWPKVATFLNSLPSG
SLILDAGCGNGKYLGLNPDCFFIGCDISAPLIKICADRGHEVLVGDAVNLPYRTGFGDAA
ISIAVLHHLSTENRRKKAIEELVRVVKKGGLVLITVWAVEQEDGSLVTKWTPLTQRYLEE
WIGPGSPRVRSPSSITLESIPEIEENNSKDHVKDSKEKADKELKKMTHLTSQTEMDGIGK
DEKNANNQQEYFVPWHLPYHRAEVSGASACALESGLAKKDDKKGAVIYNRYYHVFSEGEL
DRLVIGMNNVVVVDRFFDKSNWCIILEKTS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggtctttaatttttccagagtgggtagattgagtaagacatttttggaggccttcact
ttatcgattcttgcagttggcagtgtctgtcattctcaaattttcagaaatatgagaaaa
atcaaagtgaaaggttcgtctggcttgttttctcatgcatttgatggagaatctcagatc
caacaatctgtatcagagtgtgaagagcaaaagtgtttgtcttgcagtgttcaatccacc
cctgaaattgaaaggaagtatgtgcatcgtgtttatgatgctatagcaccccactttagt
tccaccaggtttgccaagtggccgaaggtagcaacctttctgaactcattgccttccgga
tctctcatattggatgcaggatgtggaaatggaaaatacttgggtttaaatcctgattgc
tttttcataggatgtgatataagtgcaccccttatcaaaatttgtgcagatagaggacat
gaagttctggttggggatgcagtaaatcttccttacagaactggttttggagatgctgca
atttccatagcagtgctacatcacctaagtacagagaataggaggaagaaggcaattgaa
gaattagtccgagttgtcaaaaagggcgggctggtactgataactgtttgggcagtagaa
caggaagatgggtcattagttaccaaatggactcctctcactcaaaggtacctagaagag
tggataggaccaggtagtcctcgtgtccgaagcccttcatctatcactttagaaagcatc
ccagaaatagaggagaataattctaaagaccatgtaaaagattccaaggagaaggcagac
aaggaattaaagaaaatgacgcatttaacctctcaaactgaaatggatggcattggtaaa
gatgagaaaaatgcaaataatcaacaggaatattttgttccttggcatttgccatatcac
cgtgctgaagtaagtggtgcatctgcttgtgcccttgaaagcggcctggcaaaaaaagat
gataaaaagggtgctgtgatatacaacagatattaccatgtgttcagtgaaggcgaactt
gacaggttggtaataggaatgaacaatgtagttgtagttgatcgattttttgataaatca
aattggtgtatcattcttgagaaaacttcataa
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