Jatropha curcas (Barbados nut): 105638964
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Entry
105638964 CDS
T03922
Name
(RefSeq) replication factor C subunit 2 isoform X2
KO
K10755
replication factor C subunit 2/4
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03030
DNA replication
jcu03410
Base excision repair
jcu03420
Nucleotide excision repair
jcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105638964
03410 Base excision repair
105638964
03420 Nucleotide excision repair
105638964
03430 Mismatch repair
105638964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jcu03032
]
105638964
03036 Chromosome and associated proteins [BR:
jcu03036
]
105638964
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105638964
DNA replication proteins [BR:
jcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105638964
DNA Replication Termination Factors
ELG1-RFC complex
105638964
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105638964
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105638964
Check point factors
HRAD17(Rad24)-RFC complex
105638964
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
RuvB_N
Rad17
Mg_chelatase
AAA_16
AAA_2
AAA_assoc_2
AAA_14
SLFN-g3_helicase
AAA_5
AAA_11
AAA_24
ResIII
AAA_25
nSTAND3
AAA_30
AAA_28
RNA_helicase
AAA_7
DNAX_ATPase_lid
TIP49
HP_1247_M
Motif
Other DBs
NCBI-GeneID:
105638964
NCBI-ProteinID:
XP_012078273
UniProt:
A0A067K9C9
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL
AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFAAVAVGSSGSHAGGYPCPPYKII
ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM
SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV
IPKEFLGAFYAACKSGDFDLANKEVNNIIAEGYPVSQMLVQLFDLVVEADDISDEQKARI
CKSLAAADKCLVDGADEYLQLLDVASNTMRALCNMPQEFSYEC
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagtattgccgaattcccaaccatgggttgagaaatatcgaccaaagcaagtt
aaagatgtggctcatcaggaggaggtggttcgggtcctcaccaacaccattgaaaccggt
gattgcccacacatgctgttttatggcccacctggtaccggaaaaaccacctccgctctg
gccatcgctcgccagctttttggacctgaactctacaagtccagggtcatggagctaaat
gcaagtgatgatcgtggaatcaatgttgttcgtactaagatcaaagattttgctgctgtg
gctgtaggatcttctggttcgcatgcagggggttacccttgtccgccatataaaatcatt
atcctagatgaagcagattcaatgactgaagatgctcagaatgccttgagacgtacaatg
gaaacctactccaaagttacaagattctttttcttatgcaactatatcagcaggatcata
gagccacttgcttcaagatgtgcgaaattcaggtttaagccactttcagaagacatcatg
agcgatcgtatattgtacatttgcaaagaagaaggccttaatatagatgcagaggccctt
tccaccttaagctctatatcacaaggggatcttcgtcgggctatcacttatttgcaaggg
gctgctcgcttatttggatcaacaatttcatcaaaggacctaataagtgtatctggggtc
attccaaaggagtttttaggtgcattttatgcagcatgcaaaagtggtgactttgatttg
gcaaacaaggaggtcaataatataattgcagaaggatatccagtctcccagatgcttgtt
cagctgtttgatctagtggttgaagcagatgatatatcagatgaacaaaaagctcgaata
tgcaagagtttggctgcagctgataagtgtcttgttgatggtgcagatgaatacttacag
ctgctggatgtggccagcaacacaatgcgagcactgtgtaacatgccacaagaattctct
tacgagtgttag
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integrated database retrieval system
