Jatropha curcas (Barbados nut): 105638970
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Entry
105638970 CDS
T03922
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105638970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105638970
03036 Chromosome and associated proteins [BR:
jcu03036
]
105638970
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105638970
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105638970
PBAF complex
105638970
GBAF(ncBAF) complex
105638970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
NPR3
Motif
Other DBs
NCBI-GeneID:
105638970
NCBI-ProteinID:
XP_012078280
UniProt:
A0A067KCV3
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MPASPSFPSDGRGKWKRRKRESQITRKQQPKHEDPDEDDEDDAVEEENNNNNNLDQRDDD
SEGPNPNPNSAAAAIDPNHLETEVLADGGVRICDFPCVTKLVVNRPHASVFAIAAIERAN
LSGESSSNRGQVPNLENVSYGQLQAVSAVPAEGFGSDQERNDGGNPAYVVTPPPIMEGTG
VVKRFGGRVHVVPMHSDWFSPAVVNRLERQVVPHFFSGKSPDHTPEKYMECRNYLVAKYM
DNPEKRITVSDFQGVVFGIDNEDLTRIVRFLDHWGIINYCAAPPNRESWNGGSYLREDPN
GEVHVPSAALKSIDSLIKFDKPTCRLKVADLYSSLPCHDADFSDLDNKIRERLSENHCTY
CSQPLPGIYYQSQKEIDVLLCSDCFHEGRFVTGHSTLDFIKMDPTKDYGDLDGESWSDQE
TLLLLEAMEIYNENWNEIAEHVGTKSKSQCILHFLRLPMEDGLLENIEVPSMPNSSNLSS
RDDHGRIHLHSNGDLPGSSCQDADSESRIPFANSGNPVMALVAFLASAVGPRVAAACAHA
SLAALSEDNRMNSERLHSREGSFHGEVANSIQQKEGQNEAEGGPVSADKVKAAAKAGLAA
AATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMRECEQVEKTRQRFA
AERARMMSTRIGPAGSTSQMNLAGVGPSMVNNNISSNRQQVMPPSSQPNISGYGNNQQVH
PHVSFMQRGQQQPMFPLGPRLPLAAIQPSSSAPSNVMFNASGSSQPSLNQMLRSVSGPSS
SLG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttccccttctttcccttcagatggcagaggcaaatggaagaggcgaaagcgg
gagtcccaaatcactcgtaaacaacaacctaaacatgaagaccctgacgaagatgacgaa
gacgacgccgttgaggaggaaaacaataataataacaatctcgaccagcgggatgatgat
tctgagggccctaatcccaatcccaactcagctgctgctgctatcgatccgaaccattta
gaaacggaggttcttgccgatggtggggttcgcatatgtgacttcccttgtgttactaag
cttgtggtgaatcgccctcatgcgtctgttttcgctattgcggctatagagagggctaat
ttatctggggagagtagtagtaatagagggcaggtgccgaatttggagaatgtgtcttac
gggcagctgcaggcagtctccgctgtgcctgctgagggttttgggtccgatcaggagaga
aatgatggaggcaatccggcctatgtggtcacgccacctccgattatggaagggactggt
gttgtcaaacgcttcggaggtagagttcatgtggttccaatgcattcagattggttttca
ccagctgtggtaaatcgattggaaagacaggtggtgccacattttttctctggcaaatca
ccagatcatacaccagagaaatacatggaatgtaggaactaccttgttgctaaatacatg
gacaatccagagaagaggatcacagtttctgattttcagggagtggtatttggtattgat
aacgaagatttaactcgaattgttaggtttcttgatcactggggaattatcaattactgt
gcagccccaccaaaccgtgaatcctggaatggtggatcctacttaagagaggatccaaat
ggcgaggttcatgtgccatcagctgctttaaagtccattgatagtctgatcaaatttgac
aagcccacatgtaggctcaaggtagctgacctttattcatcattgccatgtcacgatgcc
gatttctctgacttggacaacaaaattcgagagcgcctatctgaaaatcattgcacttat
tgttctcagcctcttcctggcatttactatcagtcgcagaaggagattgatgtcctgcta
tgctctgattgcttccatgaggggaggtttgtaactggacattcgaccctggattttata
aagatggatccaaccaaggattatggtgatttggatggagagagttggagtgatcaggaa
acactattgctgcttgaggcaatggaaatttacaatgaaaattggaatgaaattgcagaa
catgttggaacaaaatcaaaatcacaatgcatccttcattttcttcgtctacccatggag
gatggcttgctggaaaatattgaagttcctagcatgcccaattcgtctaatttatcaagt
agggatgatcatggaagaatacatttacattcaaatggtgatctaccagggtctagctgt
caagatgctgattctgaaagcaggatcccttttgcaaattctggaaatccggttatggca
ttggttgcgtttctggcctccgctgttggaccgagagttgctgcagcatgtgcccatgca
tcgttggcggcattgtccgaggataaccggatgaattcagagagattacacagtagagaa
ggtagttttcatggagaagttgcaaattcaatacaacagaaagaagggcagaatgaggca
gagggtggtcctgtatctgcagataaagtcaaagctgctgcaaaagctggtcttgcggct
gcagcaactaaggcaaaactgtttgcagatcatgaagagcgggaaattcaaaggctatct
gccaatatcattaatcatcagctgaagaggttggagctgaagttgaagcagtttgcggaa
gtggaaacttttctaatgagagagtgtgaacaagtggagaagacgaggcagaggtttgca
gctgagagggctcgcatgatgtcaacccggattggacctgctgggtctacttcacaaatg
aatctggcaggtgttggtccttccatggttaacaataacatcagcagcaataggcaacaa
gtgatgcctccctcctcgcaaccaaatatttcgggatatggcaacaatcaacaagtgcat
ccacacgtgtcatttatgcaacggggacaacaacagccaatgtttcctctagggccaagg
ctccctttagcagctatacaaccatcctcatctgctccatcaaatgttatgttcaatgcc
tctgggagttctcagccaagtcttaatcaaatgctgaggtccgtgtcggggcctagctct
agtttaggttga
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integrated database retrieval system
