KEGG   Jatropha curcas (Barbados nut): 105638977
Entry
105638977         CDS       T03922                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03030  DNA replication
jcu03410  Base excision repair
jcu03420  Nucleotide excision repair
jcu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105638977
   03410 Base excision repair
    105638977
   03420 Nucleotide excision repair
    105638977
   03430 Mismatch repair
    105638977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jcu03032]
    105638977
   03036 Chromosome and associated proteins [BR:jcu03036]
    105638977
   03400 DNA repair and recombination proteins [BR:jcu03400]
    105638977
DNA replication proteins [BR:jcu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105638977
  DNA Replication Termination Factors
   ELG1-RFC complex
    105638977
Chromosome and associated proteins [BR:jcu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105638977
DNA repair and recombination proteins [BR:jcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105638977
  Check point factors
   HRAD17(Rad24)-RFC complex
    105638977
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_lid_RFC1 AAA_assoc_2 AAA_22 AAA_16 AAA_5 AAA_11 DUF815 AAA_14 nSTAND_NTPase5 DNAX_ATPase_lid AAA_30 RuvB_N AAA_7 AAA_24 ATPase_2 ResIII bpMoxR AAA_19 nSTAND3 SLFN-g3_helicase AAA_3 TniB AAA_28 ABC_tran TIP49 Mg_chelatase RNA_helicase
Other DBs
NCBI-GeneID: 105638977
NCBI-ProteinID: XP_012078293
UniProt: A0A067KKP6
LinkDB
Position
Unknown
AA seq 367 aa
MNEKESFMDIDGDENEDQKQNDSYETNKGKNVVVAGTPPDIKAVPWVEKYRPQSLADVAA
HRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRG
IGVVRQQIQDFASTQSFSFSAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLI
CNHVNKIIPALQSRCTRFRFAPLDPIHVSERLKHVIKSEGLDVTESGLAALVRLCNGDMR
KALNILQSTHMASEQITEEAVYLCTGNPLPRDIEQISYWLLNESFAETLKRISEIKTKKG
LALVDIVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCNDKLQLGSLISSFTRARS
TLVAAAK
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgaatgagaaagaatcttttatggacatcgacggagacgagaacgaagaccagaaacag
aacgactcgtacgaaacaaacaagggcaaaaatgtcgttgtagccggcactcctcccgat
attaaagccgttccttgggtggagaagtatcggcctcagtcacttgcggatgtcgctgct
catcgcgacattgttgataccatcgataggctcaccagtgaaaatagactgccccatctc
ctgctatatggtcctcctggcactggaaaaacttcgactattcttgctgtggcgcgtaaa
ctgtatggagcacagtaccacaatatgattttggagctgaatgcatcagatgacagggga
attggtgtggtgcgacagcagatacaagattttgctagcactcagagcttctctttcagt
gcaaagtcatctgtaaagttggtcttactagatgaggcagatgccatgacaaaggatgca
caatttgccttgcgtagagtgattgagaaatacacgaagaacactcgatttacccttatc
tgtaatcatgtgaacaagattattccagcactacagtctagatgtactcggtttcgattt
gctcctcttgatccaatacatgtttctgaacgactaaaacatgttataaaatctgaaggg
cttgatgttactgagagtggcttagcagcacttgtgcgactttgcaatggcgatatgagg
aaggctttgaacatattgcagtcaacacacatggcttctgagcaaatcacggaagaagct
gtatacctgtgcactggaaatccattgcccagagacattgagcaaatatcttactggctt
ctaaatgaatcatttgctgaaactttaaaacgaatttctgaaatcaagacaaagaaagga
ttggcattagtagatattgtgagagaagtgactatgttcgtttttaagattaagatgcca
tcagatgtcagagttcagttaattaatgacatggctgacatagagtacaggttgagtttc
gggtgcaatgataagttgcaacttggatcgctaatttcttcatttacacgggctcgatct
acactggttgctgcagcaaagtag

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