Jatropha curcas (Barbados nut): 105638995
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Entry
105638995 CDS
T03922
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105638995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jcu03032
]
105638995
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105638995
DNA replication proteins [BR:
jcu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105638995
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105638995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
TopBP1_BRCT0
ECT2_BRCT0
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-GeneID:
105638995
NCBI-ProteinID:
XP_020536916
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MLKTKTFNGANVFMSRNLVPPEVFDALLDALKHNGAEVFLCCDPSRNGPNDYHIISSPDH
EKFEDLRAKGCTLLGPQCVFSCAKEHRALPKQGFTCCLAMDGVKILASGFEVDEKVKIEK
LVTAMGGQLHTKASSDVSFVIVKNVLAAKYKWALNNLKKPILTINWLSQCWNEHRVVPQE
SYRVLPFSGLMICVTRIPADERKEIGKIITQNGGKYSAELTKKCTHLICDAPEGDKYKVA
RRWGHIQIVTRRWFDQSVARRACLNEDSYPVQGGSIAANKTAKGSSMSHHSQDKCTATSL
SVASSRATESGFSDPDLEATLSQNMSSMFSDPPIFMKEGDKQMPAVHPINETNLDVCVAN
DSQSEDSDLYLSECRISLVGFEASELRKLVNMVRRGGGSRYMSFNDKLTHIVVGAPTEVE
KKELRGLAALGVINVVRPVWLEECDHEKKEIPVLRQHIAYDLLLPKDSMSSIRGAVVGMI
GVNQGKLSSVHSSICSDQLVGSANVGNGMPSSLENNREEKPGIKINAGKPLEATVRQSQQ
NLFSVVNDKKKNEKKMQLDSSDQNLKPLSVFKGKTFCFSNSFPEDRRAEIVQWVSQGGGE
MLEDHVKENVHFTIECHGVTPRSVDVPETTYVSSHWVHSCLEDKCLLDVGRHIIYSPLPC
QIPFPGFRNFRFCISQYEGKDRSLLRNLCFVLGAKFVEKLTRKVTHLLCKFTIGEKYEAA
CRWGICLITSEWIYECVRRNEVVAVDQFRPKVVTSQDQVAGLCIVSQFPTQPAQMISGVS
QYTSQSQDLKSEPTQIGGTSITSFGEEVRKSSDFSKKARLLESGGQKSLLSSGVHLSDSI
CNINSSGGNNSKDNKESSSCVSDVAAVIEDLLEQTSKIHDHKSPERTQHDENLYPSDSVL
GEEHRGSHSVIGLPKHWLNRPGKRDELSTPASSKDGNNGMYDGFSETQTDSQVVGYEEDL
SGRQMLIDRVRTRSSIS
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagacgaagacgtttaatggggctaacgtattcatgtcgcggaacctggtgccg
ccggaggtcttcgacgctcttctcgatgccctcaagcataatggagccgaagtttttctc
tgttgcgatccttcgcggaatggcccgaacgattaccacatcatttcctctcccgatcac
gagaaattcgaggatcttagagctaagggctgtactttgctaggtcctcagtgtgtgttt
tcttgtgcaaaagaacatagagcattgcctaaacaagggtttacttgttgccttgctatg
gatggtgtcaaaatacttgcatccggttttgaagtggacgaaaaggttaagatagaaaaa
ttggtgacagcaatgggaggacagctgcatactaaagcatcatctgatgttagttttgtc
attgtaaaaaatgttttggctgcaaaatacaagtgggctttaaataatctgaagaaacca
attttaactattaattggttatctcaatgttggaatgagcaccgtgttgttccccaagag
tcatacagggttcttcccttttctggattaatgatatgtgtcaccagaatacctgcagat
gagcggaaggagattggaaaaattataacacaaaatggtgggaaatattctgctgaactg
accaagaagtgcacacatttgatttgtgatgctcctgaaggtgacaagtataaggttgct
cgaaggtggggtcatattcaaattgtaactcggagatggtttgatcagtctgttgctaga
agagcatgtctcaatgaggattcctatcctgttcaaggtggttctatagctgcaaataaa
actgcgaagggttcctcaatgtcacatcatagccaagacaagtgtactgctacttcatta
tctgtagcatcctcaagggccacagaatctgggttttcagatccagatttggaggctact
ctgtcacagaacatgtcttctatgttctctgatccccctatatttatgaaagagggggat
aaacaaatgcctgcagtgcaccccataaatgaaacaaaccttgatgtctgtgttgccaat
gactctcaatctgaagacagtgatctgtacttatcagagtgcagaatatcacttgttggc
tttgaagcttctgagttgcgtaaattagttaatatggtgcgtagaggtgggggttcccgg
tatatgtcattcaacgataaattgacacacattgtagttggagctccaacagaggttgaa
aagaaggagctcaggggccttgctgctttgggtgtgattaatgtggttagacctgtctgg
cttgaagagtgtgatcatgaaaagaaagaaatccctgttctcaggcagcatatcgcctac
gatctgctacttcctaaagattctatgagctccattagaggagcagtagttggcatgatt
ggtgtgaatcaaggtaaactctccagtgtccattcaagcatctgctctgatcagttagtg
ggtagtgcaaacgttggcaatgggatgccatcatcattggagaacaacagagaagagaaa
ccaggaatcaaaataaatgcgggcaagcctctggaagcaactgtgaggcagtcccagcag
aacctattttcagttgttaatgataaaaagaagaatgaaaagaagatgcaacttgattct
agtgaccaaaatctgaagccattatctgtttttaaggggaaaacattctgcttttcgaat
tcttttcctgaagataggagagctgaaattgttcaatgggtgagtcaagggggaggggag
atgctggaagatcacgtgaaggaaaatgtgcacttcaccattgaatgccatggtgtgaca
ccaaggtctgtcgatgttccagaaactacttatgtatccagtcattgggtccattcttgt
ttagaggacaaatgcttgctggatgttggccgtcatatcatatattcccctcttccctgc
cagattccttttcctggttttagaaacttccggttctgcatctcgcagtatgaaggcaaa
gacaggtccctattaagaaacttgtgctttgtccttggagccaaatttgtggagaaactg
actagaaaggttacccatctattatgcaagtttaccattggcgaaaagtacgaagctgct
tgtagatggggaatatgcttgattacatctgagtggatttacgagtgtgtcaggcggaat
gaagtcgttgcagtggatcaatttcggccaaaagtagttacttctcaagaccaagtggca
ggactatgcattgtgagccaatttcctacacaacctgctcaaatgatatctggagtgtct
cagtatacaagccagtcacaagaccttaaaagtgaaccaactcagattggtggcactagc
attaccagctttggggaagaggtccggaaatctagtgatttctctaaaaaggcaaggctt
ttggaaagtggaggccagaagagtttgctttcttctggagttcatttaagtgattctata
tgcaacataaattccagtggaggaaacaattcaaaagataacaaagaatcatcttcctgt
gtttctgatgtagctgctgtcattgaggacttgctagagcagacaagcaagattcatgat
cataagtcaccagagaggactcagcatgatgaaaatctttatccatctgattcagtgctt
ggtgaagagcatcggggctctcattctgtcattgggttacctaaacattggttaaacaga
cctgggaaaagagatgagttatctactcctgctagttctaaagatggaaacaacggaatg
tacgatgggttcagtgaaactcaaacagattctcaggttgttgggtatgaagaagatttg
tcaggcaggcaaatgcttatagacagggttcgcactcgaagttccatatcctag
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