KEGG   Jatropha curcas (Barbados nut): 105639151
Entry
105639151         CDS       T03922                                 
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105639151
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jcu03019]
    105639151
Messenger RNA biogenesis [BR:jcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105639151
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     105639151
SSDB
Motif
Pfam: EDC4_C Ge1_WD40 WD40_WDHD1_1st WD40 WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_Vps41 DUF445
Other DBs
NCBI-GeneID: 105639151
NCBI-ProteinID: XP_012078509
UniProt: A0A067K941
LinkDB
Position
Unknown
AA seq 1363 aa
MASPNPQFDMHKFFMPTTTANQNQNPTPNPSNPNLMIPPPSSIPSSSYPPTTGTNFPFQF
PQQFHHLPSYPPPPLTNVPPQRSLSYPTPPLQLQPQPQPQQQQQQQQNPSSRNNNERSGA
EIMALLRPTPPPQQEPSPPPQLNQHPPEFSGGNNVPPVGPIRMPSSKMPKGRRITGDNVV
YDVDVRLQGEVQPQLEVTPITKYTSDPQLCLGRQIAVNKSYICYGLKQGNIRILNINTAL
RSLFRTQSQRVTDMAFFAEDVHLLASAGIDGRINVWKISEGPDEEDKPQITGKAVIAIQI
VGEGEIKNPRVCWHCYKQEILVVGVGKRVLRIDTNKVGKGGVYSSEAPLECPVDKLVDGV
QLVGKHDGEVTDLSMCQWMTTRLVSASMDGTIKIWEDLKALPLVVLKPHDGLSVYSATFL
TATSRPDHIILITAGPQNREVKIWVSAKEEGWLLPSDCDSLNCIQTLELKNSDETRVEET
FFNQVVALSQVGLLLLANAKRNAIYAVHLDYGPTPAATRIDYISEFTVTMPILSLTGTSD
VLHDQYVAQIYCVQTQAIQQYTLELSQCLPPLLDNVGSEKLDSNVSHDLANVEGVAALDS
RGSNFSDIPVSSTSVEAASLPDIPSTSIDSKPPALTPSISDADISCISSSPPSLTHNDFS
ELTDAARLEQGPPPSDQSVNQQVTDYSVDQQMESIRTNLSDVPSLDIDSRNDETKGTQED
NSGMLNRPITFKHPTHLITPAEILMGVPSPNNNNEVKTEVEANIQDVVINSDVSNSEVEV
KEVGEMKSTQNDEFGFRGESKNLMSENKEKFFCSQASDLGIEMARECSAISAETYSLEEP
QQVDVAGVAEFHAQHSHTSEEVNDSTKALSERVSESTVPAIVQQSTTPSTKGKKQKGKIS
QASGPLSPSPSAFNSIDSSNEPAGHSSLPSLEAAFPQLFAMQDMLNQLLTAQKDMQKQMS
NMVAVPVSKECRRLEAALGRSIEKAVKANTDALWARFQEENAKIEKLLRDRTQQISNLIS
NFVNKDLMAMLEKAMKKELSSVGPGVARTLSPVIEKTISSAIAESFQRGVGDKAVNQLEK
SVNSKLETTVARQIQAQFQISGKQALQDALKATLEASVVPAFEMSCKAMFEQVDSTFRKG
MVEHTTAAQQHFESAHSSLAVALREAINSASTLTQTLNGELAESQRKLLALVAVGANSGS
ANPLVTQLSNGPLAGLHDKVETHLDPTKDLSRLISERKYDEAFTIALQRSDVSIVSWLCS
QVDLHGILATVPLPLNQGVLLSLLQQLACDISNDSARKLAWMTDVAAAINPADQMIAMHV
RPIFEQVYQILHHQRSLPAITGAELSTIRVLMHVINSMLVTCK
NT seq 4092 nt   +upstreamnt  +downstreamnt
atggcttccccaaatccacaatttgacatgcacaaatttttcatgccaacaacaacagca
aaccaaaaccaaaacccaaccccaaacccttcaaatcctaatctcatgattccacctcca
tcttcaattccttcttcttcttatcctccaactactggaactaactttcctttccaattc
cctcaacaattccaccatctcccttcatatcctcctcctcctctcaccaatgtgccgccg
cagcgttctctttcttatcccacgcctcctcttcaactgcaaccacagccgcaaccccag
cagcagcagcaacagcaacagaacccttcttctcgtaacaataatgagcgcagtggggct
gaaatcatggcccttctccgccccactcctccgccacagcaggaaccgtcaccgccgcct
caattaaaccagcatccgccggaattttctggtggaaacaatgttccgcctgtgggaccc
attaggatgccgagcagtaagatgcctaagggcaggcggattacgggtgataatgtggtg
tacgatgtggatgtgaggttgcaaggggaggtgcagcctcagcttgaggtcacgcccata
actaaatacacttcggatcctcagttgtgcttgggaaggcaaattgctgttaataagtct
tatatttgttatgggttgaagcaggggaatattaggattcttaacataaatactgccttg
aggtccttgtttcgcacccagtctcagagggtcactgacatggctttctttgctgaggat
gtccatctcttggctagtgctggcatagatggacggattaatgtctggaaaatttctgaa
ggtccagatgaggaagataagccacaaattacaggaaaggctgttattgccattcaaata
gtcggagagggagaaattaaaaatccacgagtttgttggcactgctacaaacaagaaatt
ttggtggttggggttggtaagcgtgttcttagaatcgacactaacaaagttggaaagggt
ggagtctattcatcagaggcacctctagaatgtcctgttgacaaactggttgatggtgtc
caattggttggaaaacatgacggagaggtgactgatttatcaatgtgccaatggatgacc
actcgtttagtttctgcttctatggatggcacgattaaaatttgggaggatctcaaggca
ttaccccttgtagtattaaagcctcacgatggcctttctgtttactcagctacgttcttg
accgctaccagcaggccagatcacatcatacttatcacagcgggtccccaaaatcgggaa
gtgaaaatttgggtctcagccaaagaagagggctggctcttgcctagtgattgtgattca
ttgaattgcatccagactttagagctgaagaattcagatgaaactcgagtagaagagaca
ttcttcaatcaagttgtagctctgtcccaagtgggcctcctcttacttgcaaatgctaag
aggaatgccatatatgctgtgcacttggattatggtcctaccccggcagcaacccgtata
gattacatatcagaattcactgttaccatgcctatcttgagtttaacagggactagtgat
gttttacatgaccagtatgttgctcagatttattgtgtccagacacaggctatccagcaa
tacactttggagctaagccagtgcttgcctccattgttggataatgtgggttcagagaaa
ttggattctaatgtttcacatgatctagctaatgttgaaggagttgctgctttggactcg
cgtggaagcaacttttctgacatccctgtaagctctacttcggttgaagcggcttctttg
ccagacattccctctacaagtattgactctaaacctcctgctttaaccccttcaattagt
gatgctgacatatcttgtatttcatcatctcccccttccttgacccacaatgatttttct
gagcttacagatgcagcgaggcttgaacaaggccctccacctagtgaccagagtgtaaat
cagcaagttactgattattcagttgaccagcaaatggagtctattcgcacaaacttatcg
gatgttccttccttagatattgactccaggaatgatgagacaaaaggtacacaagaagat
aattctggcatgcttaatcgaccaatcacatttaaacacccaacacatctgataactcct
gctgagatcttaatgggtgttccatctcctaataataataatgaagtcaagactgaggtt
gaagctaatattcaggatgtggttatcaatagtgatgtcagtaattcagaggtggaggtt
aaagaagttggtgaaatgaaatctactcagaatgatgaatttggcttccgaggagaatct
aaaaatcttatgtcagaaaataaggagaagttcttttgctcccaggcttcagaccttggt
attgagatggccagggagtgtagtgctatatcagcagaaacttattctttggaggagcct
cagcaagttgatgtcgctggtgtagctgagtttcatgcccaacattctcatacaagtgag
gaagttaatgactccacaaaagccttatcagagagagtttctgaatcaaccgtacctgca
atagttcagcaatcaacaactccaagtacaaaggggaagaaacagaaggggaaaatttct
caagcatcaggtccattatctccatcaccaagtgcttttaattcgatagattcttccaac
gaaccagctgggcattcaagtctcccttctttggaagctgcctttcctcaactttttgct
atgcaagatatgcttaatcagctattgactgcacaaaaagacatgcagaagcagatgtca
aatatggttgctgtccctgtttcaaaagaatgtagaagactggaggcagctttagggcgg
agcattgagaaagctgttaaggcaaatactgatgcattatgggctcggtttcaagaagag
aatgcaaaaattgagaagctgttgcgggatcgcacacaacaaatttcaaatttgatctct
aactttgtcaataaggacttgatggccatgctagaaaaagcaatgaagaaagaattatct
tcggttggaccaggtgtagcccgtacactgtctccagttatagaaaagacaatatcttct
gctattgcagagtcattccagagaggtgttggtgataaggcagtgaatcaactggagaaa
tcagttaattcaaaacttgaaacaactgttgctaggcaaattcaagcacagttccaaatt
tctggaaagcaagctctccaggatgccttgaaggcaactttagaagcttcggtagtccct
gcctttgagatgtcatgcaaagctatgtttgagcaagtagattccaccttccggaaaggg
atggttgagcatacaactgcagctcagcagcattttgaatctgcacattcttcactggct
gttgctttaagggaggccatcaactcagcatcaacgttgacacaaaccttgaatggagaa
ttggctgaaagtcaaaggaagctgttagctcttgtggctgttggtgcaaactcaggttca
gcaaatccacttgttacgcaactgagcaatggacctttggctggcctccatgataaggtt
gagacgcatttggatccaacaaaagacctatcgagattgatatccgaacgcaaatatgac
gaggctttcactattgccctgcaaagaagtgatgtctcaattgtgtcatggttatgttct
caggttgatttgcatgggatattagcaacggttcctctcccattaaaccaaggagtacta
ctctctcttctacagcaattggcgtgtgatattagcaacgattcagctcgaaagctggca
tggatgacagatgtggcagctgccataaacccagcagaccaaatgattgcaatgcatgta
aggccaatttttgagcaagtatatcagatcctgcaccatcaacggagcttgcctgccatt
actggtgctgaactctcaacgatccgtgttcttatgcatgtcatcaactcaatgcttgtg
acttgtaaatga

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