Jatropha curcas (Barbados nut): 105639877
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Entry
105639877 CDS
T03922
Name
(RefSeq) RNA-binding protein 1
KO
K14411
RNA-binding protein Musashi
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105639877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105639877
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105639877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
OB_RNB
Nup35_RRM_2
RRM_5
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
105639877
NCBI-ProteinID:
XP_012079447
LinkDB
All DBs
Position
Unknown
AA seq
263 aa
AA seq
DB search
MEMVSNNKAKLFVGGVKRVNEEMLRRYFGKYGQVKEVLIVLDKITGISRGFGFVTFEDPS
AADKALQHRDHFIRGKKVDVKPAIPKRRSKQEQDNDEDSNSTEFRTKKIFVGGLPPNITK
EELKNFFDSFGTITDAVVIHNKLTGKPRGFGFISFDSEETVDIILQERYRQFNGYVVEVK
KAKSTDMMGKNDNYINNMGFYGSYPSYYPYYWDTYNALPYFYPGGSTPFAGWVFPQNYLE
GGDNTSAPSNQVQSLISAGCWQF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtatcaaataacaaggcaaaattatttgttggaggagtgaagagagttaat
gaagaaatgttaagacgatattttggcaagtatggccaagtaaaagaggttctgattgtg
ctggataaaatcacaggcattagtagaggtttcggctttgtcacttttgaagatccttcg
gcagctgataaagcccttcaacaccgcgaccacttcatccgtggcaagaaggtggatgtg
aaaccagcaataccaaagagacgttctaaacaagaacaagataatgacgaagattctaat
tctactgaatttagaactaagaaaatttttgtaggaggtttgccacctaacattaccaag
gaagagctcaagaatttctttgactctttcggtacaatcactgatgcggttgtgattcac
aacaaattaactggcaaacccagagggtttgggttcattagttttgactctgaggagact
gttgatataatattgcaagaaagataccgtcaattcaatggttacgttgtggaggttaaa
aaggctaaatctacagatatgatgggcaagaatgataattacataaataatatgggtttt
tatggcagttatccttcgtattatccttattactgggatacgtataatgctcttccttat
ttctatcctggtggatctactccttttgctggttgggtattccctcaaaattatttggag
ggtggagataacacaagtgcaccttcaaatcaagtgcaatctttgatctctgctggttgt
tggcaattctaa
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