Jatropha curcas (Barbados nut): 105639985
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Entry
105639985 CDS
T03922
Name
(RefSeq) small RNA degrading nuclease 3 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105639985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcu03009
]
105639985
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
Pre-60S particles
RNases
105639985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HXXSHH
Motif
Other DBs
NCBI-GeneID:
105639985
NCBI-ProteinID:
XP_020537255
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MNHKHANAIATAPEKVLVEIVKLIQRQERKGTKGGWKEFLKDHDSKFGSSISDPAKRSRK
TLISFLHTFTEKDDLKFVDSVLRLHANREVLEQIRKETPDNESPEQRLVSLTVEHPFYLS
KYAFPSYDKQDWIITKLPEKSKLMSSNAIIAIDCEMVLCEDGTDALVRVCVVDHHLQVKL
DEKVNPCKPVADYRTEITGVTARDLDGVSCSLADIQKSMKKLLQKGTILVGHGLYNDLQA
LMVDHQRVIDTSFIFRRSDGRLPSLDTLCKSVLGYELRKEGAPHNCVDDACAAMKLILAK
VELGVNTDIPLNHEDVLEGEMAKLLLHNIPINVPIKELHGVFPQKFIIESKPPKKAHGVK
YSALAIFKNSQKACQAFENLNGRLEKDKNGLQQKMITFKLNTGATASIFVRKMTHDNSPH
QGSLKKRVFQGEELIESKKLKTDDCDDHVKEIERLKGELREKDLNKCDNHLKEIERLKQD
LSAKDFQISAQDKIISKLKKELKEMKKKRKGH
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaaccataaacacgccaatgcaatagccaccgcgccggaaaaggtgcttgtcgaaatt
gtgaagttgattcaaaggcaagaaagaaaaggtactaagggaggctggaaggagttccta
aaggatcatgattcgaagttcgggtctagtataagtgacccagcgaagaggtcccgtaag
actttgatttcgtttctacacacctttactgagaaggatgacttgaagtttgtggattct
gttcttcggttgcatgcgaatcgtgaggtattagagcaaataagaaaagaaactccagat
aatgaatcacctgaacagaggctagtcagtttaactgttgaacacccattttatctttca
aagtatgcgtttccatcatatgataagcaggactggataataacaaagctccctgaaaaa
tccaagttgatgagctcgaatgcaatcattgctattgactgtgagatggttctttgtgaa
gatggtactgatgctttagtgagagtgtgtgttgtggatcaccatttacaggtcaaactt
gatgaaaaagtaaacccttgcaaaccagttgcagattatagaactgagattactggagtt
actgctagagatttggatggagtgtcttgttcattagcagacatacaaaaatccatgaag
aaactcctacagaaaggaactattttagtgggccacggtttatataatgacctgcaggca
ctgatggtagaccatcagagagtgattgacacgtcatttatcttcagacgttcagatgga
cgtcttccttctttagacaccttgtgcaagtctgtgctaggttatgaacttcgcaaagaa
ggtgctccacacaattgtgtagatgatgcctgtgcagcaatgaaactcattcttgccaag
gtcgaactcggagttaatactgacattccattgaatcatgaggatgtgttggaaggtgaa
atggcaaagctacttctccataatataccaattaatgtccccatcaaagaattacatgga
gtttttcctcagaagtttataattgagtccaagccgcctaagaaagctcatggagtgaaa
tattctgcacttgcaatatttaaaaattcacaaaaggcatgccaggcatttgaaaacttg
aatgggagactagaaaaggacaaaaatggactgcaacagaaaatgattacatttaaactc
aacacaggagcaactgctagtatatttgttcgtaaaatgactcatgataattctcctcat
caaggttcgctcaaaaagagagtttttcaaggtgaggaattaattgaatccaagaaactg
aagactgatgattgtgatgatcatgtgaaagagattgaaagattaaagggagaacttaga
gaaaaggatttaaataagtgcgataaccacttgaaagagattgaaagactaaagcaggat
ctgagcgcaaaggattttcaaatctctgcacaggataagatcataagtaagctcaagaaa
gagctgaaagaaatgaaaaagaagagaaaaggacactaa
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