Jatropha curcas (Barbados nut): 105640207
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Entry
105640207 CDS
T03922
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105640207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105640207
03036 Chromosome and associated proteins [BR:
jcu03036
]
105640207
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105640207
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105640207
PBAF complex
105640207
GBAF(ncBAF) complex
105640207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DUF3654
Motif
Other DBs
NCBI-GeneID:
105640207
NCBI-ProteinID:
XP_012079848
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MPMNNNNPAKSLGAPPTFANSSVISQSTSMNTQSTHLLTHSQPQTQGASTFPGHFQLSEP
QAQVLGHSQYAQAAHAHFQAQLQSTNQSIAQPQNSNPSNVGVSSPSVPTPGTASAKRANP
RPPSRPPGGSSNSNTASPFKTMELTPAARRKKQKLPEKQIPDKVAAMLPESALYAQLLEF
EARIDAAMTRKKMDIQESLKNPPRIRKTLRVYIFNTFENQVQGEKNNAEPPSWSLKIVGR
ILEDGKDPMLAGIPQKPYPKFSSYFKKITIYLDQSLYPDNHVILWESARSPVLNEGFEVK
RKGDKEFTAIIRLEMNHVPDKFKLSPALSEVLGIEVETRSRVLVAIWHYVKSRKLQIPTD
QSSFMCDPPLKKLFGEEKMKFAQVSQKIGPHLTPPQPIHLEHRIKLSGNCPTGTTCYDIM
VEVPFPLQKDLAAFLANTEKHKEIDACDQLICDAIKKIHEHRRRRAFFLGFSQSPAEFIN
ILMASQSKDLKLVAGDASRTAEKERHSDFYNQPWVEDAVIHYLNRKSVGIDAPGST
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgaataataataatcctgcaaaaagcttaggggcaccacctacatttgccaat
tctagtgtaatatcacagtctacgtccatgaacacccaatcaacccatctactgacacac
tcacaacctcaaacacaaggcgcgtccacctttccaggccattttcagctttctgaacca
caagcacaagtgctaggccattcacaatacgcacaggcagctcatgctcacttccaagct
cagttacaatcaactaatcaatccattgcccagccgcaaaactctaatcctagtaatgtt
ggtgtatcatcaccctctgttcccacccctggcactgcaagtgccaaaagggctaacccg
agaccaccttcaaggcctccaggaggctcatccaatagcaatacagcttcaccatttaaa
acaatggaattaaccccagctgcgcgaaggaagaagcaaaagcttcctgagaagcaaata
cctgataaagtggctgcaatgttgccagagtctgcactctatgcgcaattgcttgaattt
gaagctaggatagatgctgctatgacaagaaaaaagatggatattcaagagtcactaaaa
aaccctcctcgtattcggaaaacacttcgagtatatatttttaacacttttgaaaatcaa
gtgcaaggagagaagaataatgcagagcctccttcttggtcattgaagattgttgggagg
atattggaagatgggaaagatccaatgctggctggaattccacagaaaccatatccaaaa
ttctcatcgtacttcaagaaaattacaatatacttggatcaaagtctctatccagataac
catgtaattctatgggaaagtgctcgatctcctgtacttaatgagggttttgaagtgaag
agaaaaggagacaaggaattcacagcgataattagactagaaatgaatcatgtgccagac
aaattcaagctttcacccgctttatccgaagttcttggaattgaggtggaaactcgttca
agagttttagtggcaatctggcattatgtgaagtctaggaagttgcagatcccaactgat
caatcctccttcatgtgtgatcccccccttaagaaattatttggggaagaaaagatgaaa
tttgcacaggtttcacagaagataggtccgcatttaactcctccgcaacctattcatttg
gagcataggatcaaactatccggcaattgcccgactggaactacttgctatgatattatg
gttgaagttccttttccattgcaaaaggaccttgctgcatttttagccaacactgagaag
cacaaagaaattgatgcttgtgatcaattaatatgtgacgctataaagaagatacacgag
catcgaaggaggcgggctttctttcttgggttcagtcagtcgccggcagaatttattaat
attttaatggcctcccaaagcaaagatctaaagcttgttgctggagatgcaagccgtact
gcagaaaaggagcgccattctgatttctacaatcagccttgggttgaagatgctgttatt
cattacctcaatcgcaagtctgttggaattgatgctcctggaagcacttga
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