Jatropha curcas (Barbados nut): 105640316
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Entry
105640316 CDS
T03922
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105640316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jcu03041
]
105640316
03009 Ribosome biogenesis [BR:
jcu03009
]
105640316
Enzymes [BR:
jcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105640316
Spliceosome [BR:
jcu03041
]
Complex A
U1 snRNP components
U1 related factors
105640316
Complex B
105640316
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
Pre-60S particles
Helicases
105640316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
105640316
NCBI-ProteinID:
XP_020537458
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MNPYDHRYSDPESYRRRRSDLMGPPQPVGPPVAGVPYGRSGPVPYGGPPPPAFVGRGGPG
PVGGYPPFEPPVGRFDIGRGSGTGSGGRAFSGSRPNGHIGDRRPDAARGGGGRGRDNGRG
GHRGGRVSGGGGRGFAGGRGFDGGRGGGRGARHGGVASRGDLDDIALPKQDFGNLVPFKK
NFYIESPSVQSMSENDAMMYRARRDITVEGHDVPKPIRMFQEANFPEYCLEVIAKLGFVE
PTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLVQGEGPIVLILAPT
RELAVQIQEEALKFGSRANVTSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAQR
TDLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPREVETLARQFLRN
PYKVIIGSADLKANQSINQIVEVVTEVEKYNRLIKLLKEVMDGSKILIFMETKKGCDQVT
RQLRMDGWPALSIHGDKNQAERDWVLSEFKCGRSPIMTATDVAARGLDVKDIKCVINYDF
PSSLEDYIHRIGRTGRAGARGTAITFFTHANAKFARDLIKILQEARQILPPTLSAMARSA
GTHGGSGGNFRSRGRGGFGNRSLISGSNTIPLGSRRPW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttacgatcatagatattccgaccccgaatcgtaccgtcgccgtcgcagtgac
ctgatgggtccacctcagccggtgggaccgccagtggcgggggtaccttatggtcgcagc
ggacctgtgccatatggtggtcccccaccgcctgcttttgtgggaagaggtggccccgga
ccagtaggtggatatccgcctttcgagccccctgttggtaggttcgatattggtcgaggc
agcggcactggcagtggtgggagggccttcagtggtagccgtcctaatggtcatattggg
gatagaagacctgatgcagctcgtggcggtggtggaaggggccgtgataatggacgagga
ggacatcgtggtgggagagtttctggaggcggtgggcgtggttttgctggaggaaggggg
tttgacggaggccgtggtggtggtagaggagctaggcacggtggggtagcttctagaggc
gacttggatgatattgctcttcccaagcaggactttgggaatttggtaccctttaagaag
aatttctacattgagagtccttcagttcagtctatgtctgaaaatgatgcgatgatgtat
cgtgcaagaagggatatcactgttgaagggcacgatgtgcctaagcctattcgaatgttt
caagaggcaaatttcccagaatactgcttagaggtgattgccaagttgggttttgttgag
ccaacaccaatccaggcccaagggtggcctatggctctcaagggtagagatttaattggc
attgcggagacgggttctggtaagactttggcatacctgctaccagccttggtgcatgtt
agtgctcagcctcgattggtgcaaggtgagggtccaattgtgctgatattagctcccaca
agagaattagctgttcaaatccaagaagaagctttgaagtttggttcgcgcgctaatgta
acgagtacttgtatttacggtggtgctcccaaaggacctcaaattcgtgatcttcgaagg
ggtgttgaaattgtgattgctactcctggtcggctgatagatatgttagaagctcaacgc
acagacttgcgaagagtcacttaccttgtcttggatgaggctgatcggatgttggacatg
ggatttgagcctcagattaggaaaattatatctcaaatccgaccagatagacagacattg
tattggagtgccacatggccaagggaggttgaaactttagcaagacagttcttgcgcaat
ccgtacaaggtaattattggatcagcagatctaaaagcaaaccaatcaattaatcaaatt
gttgaagtagtcacagaggtggagaagtacaacaggctgatcaaactgctaaaagaagtg
atggatggaagtaaaattcttatattcatggagacaaaaaagggctgtgaccaagttaca
aggcagttgaggatggatggctggccagctttatccatccatggtgataaaaatcaggct
gaaagggattgggttctgtctgagttcaaatgtggcagaagtcctataatgacagccact
gatgtcgctgcacgtggtcttgatgtgaaggacataaagtgtgtgatcaactatgatttt
ccttccagccttgaggattatatccacaggattggccgaactggtcgtgcaggggctagg
ggaacagcaattacatttttcacacatgcaaatgcaaagtttgctcgggatcttatcaag
atcctacaggaagctcggcagattctgccaccaacattgtctgctatggctcgttcagct
ggcactcatggaggttctgggggtaacttccgctctagagggcgaggaggctttggcaat
cgctcgttaatttcaggatctaatactattcctcttggttcaaggagaccttggtag
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