Jatropha curcas (Barbados nut): 105640340
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Entry
105640340 CDS
T03922
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105640340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105640340
03009 Ribosome biogenesis [BR:
jcu03009
]
105640340
04131 Membrane trafficking [BR:
jcu04131
]
105640340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jcu04147
]
105640340
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105640340
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
105640340
Membrane trafficking [BR:
jcu04131
]
SNARE
SNARE associated proteins
Others
105640340
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105640340
Exosome [BR:
jcu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105640340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
AAA_18
ATPase_2
Parvo_NS1
Vps4_C
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
AAA_lid_PRS2_C
NB-ARC
TsaE
AAA_24
ResIII
DUF815
Zeta_toxin
Sigma54_activ_2
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
105640340
NCBI-ProteinID:
XP_012080012
UniProt:
A0A067KFM2
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MADPSSSQPSSSSDPKSGKRDYSTAILERKKSPNRLVVDEAINDDNSVVSMHPDTMEKLQ
LFRGDTVLIKGKKRRDTVCIVLADEQCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKY
GKRVHILPIDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIETDP
GEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFK
SIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE
EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPN
SIDPALRRYGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVAKDTHGYVGADL
AALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGSSNPSALRETVVEV
PNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI
ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVG
DAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEA
SRLQIFKACLRKSPVSRDVDLTALARHTHGFSGADITEICQRACKYAIRENIEKDIEREK
RKQENPEAMEEDDVDEVPEIKAAHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGIGSE
FRFSDHSENAAAGGASDPFASATAAGDDDDLYN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaagctctagccagccctcttcttcctctgacccaaaaagtggtaaaaga
gattattccactgcaattttggagagaaagaagtctcccaaccgtcttgttgttgatgag
gccattaatgatgataattctgtggtttctatgcatcctgataccatggaaaagcttcaa
ctttttaggggagatactgtactaattaaggggaaaaagagaagagacacagtttgcatt
gttctcgctgacgaacaatgcgaagaacccaaaatcagaatgaacaaagtcgtcagatct
aatcttagagtacgccttggagatgtggtttctgtccatcaatgtcctgatgtgaagtat
gggaagagggtccacattcttccaattgacgacactattgagggtgttacaggcaatctc
ttcgatgcatatttaaagccatatttcttggaatcttaccggcctgtgaggaagggtgac
ctattcttggtcaggggtggtatgcgaagtgttgaatttaaagtgattgagacagaccct
ggtgaatattgtgttgttgcaccagacactgaaatattctgtgaaggagagcctatcaag
cgtgaggatgaggagagattgaatgaggtgggctatgatgatgttggtggtgttaggaag
caaatggctcagattcgtgagctagtagaacttcctcttaggcacccacaacttttcaaa
tcaattggtgtgaagcctcccaaaggtattttgctctatgggccacctggttctggaaaa
actctgatcgcaagagctgtagcaaatgaaacaggtgcattcttctttttaattaatggt
cctgagattatgtcaaagttggctggtgagagtgagagcaacttgaggaaggcatttgag
gaagctgaaaagaatgctccatccattatctttattgatgagattgattctattgctcca
aagagggaaaagacccatggtgaggtggagaggcgtatagtatcgcaacttttgacgtta
atggatggccttaagagcagggcacatgttattgttatgggagctaccaataggcctaac
agtattgacccagctctgaggagatatgggagatttgatagagagattgacatcggtgtg
ccagatgaaattggacgtttggaagttctcagaatacatactaaaaacatgaaacttgct
gaagatgttgatcttgaaagagttgcaaaagatacacatggttatgttggtgctgatctt
gctgccctttgcacagaggctgctcttcagtgtattagagagaaaatggatgtcattgac
ttggaggatgagacaatcgatgctgaggtgttaaactcaatggccgtgaccaatgaacac
ttccagactgcattgggatcttcaaatccatcagccttacgtgaaacagttgtggaggtt
cctaatgtctcatgggaagacattggtggattggaaaatgttaaaagagagcttcaagag
actgtccaatatcctgttgaacatccagagaagttcgagaaatttggcatgtcaccttct
aaaggtgttctcttttatggacctcctggttgtggtaaaaccttactcgcaaaagcaatt
gcaaatgaatgccaggccaacttcataagtgttaaaggtcctgagcttctgactatgtgg
tttggagaaagtgaagcaaacgtgcgggaaatatttgacaaagcacggcaatctgctcct
tgtgtacttttctttgatgaacttgattcaattgcaactcagcgcggtagctctgttgga
gatgctgggggtgctgcagatagagtcttgaatcaacttctgacagaaatggatggaatg
acagctaaaaagacagtgtttatcattggtgcaacaaacaggccagatattattgaccca
gcattgcttaggcctggtcgcttggaccagttgatttatatccctctacctgatgaagct
tcccgtcttcagatatttaaagcatgtttgcgcaagtcacctgtctccagggatgttgac
ctgactgctcttgcacgacatactcatggttttagtggcgcagatatcactgaaatttgc
cagcgtgcttgcaaatatgcaattagagaaaatattgagaaggatattgagagagagaaa
aggaagcaagagaaccctgaggccatggaagaagatgatgttgatgaagtccctgagata
aaggcagctcattttgaggaatcaatgaagtatgcccgccgaagtgttagtgatgctgac
atcaggaagtatcagctctttgctcagaccctgcaacaatctcgtggtattggaagtgag
tttaggttttcagatcactctgagaatgctgcagctggaggagcttcagatccatttgct
tcagcaacagctgctggagacgatgatgatctctataactaa
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