Jatropha curcas (Barbados nut): 105640405
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Entry
105640405 CDS
T03922
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105640405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
jcu04040
]
105640405
Ion channels [BR:
jcu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105640405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF3974
UBM
Motif
Other DBs
NCBI-GeneID:
105640405
NCBI-ProteinID:
XP_012080094
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MNNLHYYASARFRGFPAGFSLRRKVPWWYQILDPGSDFINRWNHIILFTFMVAMFLDPIY
FYLPVIGGDACMDIDFPLGVWVTLARTVTDLFFIMHVIVKFRTAFVAPSSRVFGRGELVR
DPKAIAIQYLKTRFVIDFTAALPLPQVIIWFVIPAVKTPSANHAKHTVSLVVLFQYIPRI
LAVIPLNRRIVKTTGAVAKTAWSGAAYNLVLYVLASHILGASWYLASIQRQHECWDIQCE
IEKNHTHSPSCNPLFLDCTTRDTPERDAWLRVTHLLTSCDARNDEHFQFGMFADAFINHV
GEADFIDKYFYCLWWGLRNLSSYGQNLMASTHEGELLFSIGICIMGLVLFAHLIGNMQTY
MQSTTARLEEWRIRRRDTEEWMSHRQLPLELQERVRRFVQYKWIATRGVDEESILKALPL
DLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVSSLNTRDTYIVREGDPVNEMLFI
IRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPTSRLNLPLSTRTVKALSEVE
AFALRAEDLKFVAKQFKRLHSKKLQHAFRYYSHQWRTWGACYIQTAWRRLKRRKLQLELA
RQESLFYAQAMDGEEDYDDGGEGSSMDNANNAQHLGVTFLASKFAANTRRGMTKQHTLVP
DDSTLKMPKFFKPEEPDFYGDHEDS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaataacctccattattacgcctccgcccgtttccgtggctttcctgcaggcttttct
ctccggcgaaaggtcccctggtggtaccaaatcctcgatccgggaagcgactttattaac
agatggaatcacattattctgtttacttttatggtcgccatgtttttagacccaatctat
ttctatcttccggtgatcggcggcgacgcttgcatggacatcgactttcctttaggtgtt
tgggtcacgttagctcgcaccgtcaccgacttgttctttatcatgcacgtcattgttaag
tttagaacagcattcgtagccccaagttcccgcgtttttggaagaggagagctcgttaga
gaccctaaagccattgccatacaatacttgaaaactcgcttcgtcatcgatttcactgct
gctcttcctcttcctcaggttataatttggtttgtaattccagccgtgaaaactccttcg
gctaatcatgctaagcacacagtttctttagtagttttatttcaatacattcctcgtatt
ctggctgtgattcctctaaatcgccggatcgttaaaactaccggagcagtcgccaagaca
gcttggtcaggagctgcatataatcttgtactttatgttcttgctagccatatattggga
gcctcatggtatctggcatcaatacaaaggcaacatgagtgttgggacatacaatgcgaa
atagagaaaaatcacacacattctccttcttgtaaccctttgtttcttgattgtactaca
agagataccccagaacgcgatgcttggcttagagttacccacttgctcactagttgcgat
gctagaaatgatgaacatttccagtttggaatgtttgctgatgcctttattaatcatgtt
ggtgaagcagatttcattgataaatatttctattgcctttggtggggcttaagaaatcta
agttcatatgggcagaatttgatggcaagtactcatgaaggtgaattattattcagtatt
ggtatttgcattatgggtctagttttgtttgcacatctcataggaaatatgcagacatat
atgcaatctacaactgctagactagaagaatggaggattcggagaagagacactgaggaa
tggatgagccaccgtcaattaccactagaattgcaagaacgagttcgacgttttgtccag
tataaatggatagccacaagaggtgtagatgaagaatctatcttgaaagctttaccttta
gacttgagacgccaaatccaaagacatctttgtctggctcttgttcgacgagttccattt
ttcgcacaaatggatgatcagctactggatgcaatatgcgaacgcctcgtttcgtctcta
aacacaagagatacatatattgttagagaaggagatccagtaaacgaaatgcttttcatt
attagaggacaattagaaagctcgaccactaatggcggaaggtctggttttttcaactct
attacattacggccaggtgatttctgtggtgaagagttattgacatgggcattaatgcca
acatctcggttaaacctaccattatcaactcgaactgttaaagcactaagtgaagttgag
gcctttgcacttagagcagaagatctaaaatttgtagctaaacaatttaaacgtttgcat
agtaaaaagctgcaacatgcttttagatattactcgcatcaatggcggacttggggagct
tgttatatacaaactgcatggagaaggttgaagagaaggaaactgcaattggaattagca
aggcaagagagtttattttatgctcaagctatggatggagaggaggattatgatgatggt
ggtgaaggatcatcaatggataatgcaaacaatgcacaacatcttggggttacatttctt
gcttcaaaatttgctgcaaatacaagaagaggaatgactaagcaacatacgctggttccc
gatgattctaccttgaaaatgcctaagttttttaaaccagaagaacctgatttctatggc
gatcatgaagatagttga
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