Jatropha curcas (Barbados nut): 105640614
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Entry
105640614 CDS
T03922
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105640614
Enzymes [BR:
jcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105640614
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
105640614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
ResIII
Helicase_C
AAA_22
T2SSE
Tc-R-P
Motif
Other DBs
NCBI-GeneID:
105640614
NCBI-ProteinID:
XP_037493304
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MEEKDIGALIRYPHGGKLVKQYLGYFPWIQLSATVSPITRTVLKVDLLITPDFIWKDRFH
GTAQRWWILVEDSENDHIYHSELFTLTKRMARGEPQKLTFTVPIFEPHPPQYYIRAVSDS
WLHAEAFYTISFHNLALPEARTSHTELLDLKPLPVTSLGNNIYEGLYNFSHFNPIQTQIF
HVLYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQPDMKVIYIAPLKAIVRERMHDWRKR
LVSQLGKKMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEI
HLLGADRGPILEVIVSRMRYISSQTERAVRFVGLSTALANAGDLADWLGVGEIGLFNFKP
SVRPVPLEVHIQGYPGKYYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDL
IQFAAADEYPRQFLSMTDETLQMVLSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELF
ANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQY
DQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEQLHDHLNAEIVTGTICHKEDAMHYIT
WTYLFRRLMVNPAYYGLESAEPETLSSYLSRLVQNTFEDLEDSGCIKMNEDNVESMMLGM
IASQYYLSYMTLSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEENYNEALSGRVRY
MVDKSRLDDPHVKANLLFQAHFSQLELPISDYTTDLKSVLDQSIRIIQAMIDICANSGWL
LSSITCMHLLQMVMQGLWFDKDSSLWMLPCMNADLVASLSKKGISSVQQLLDLPKATLQA
MIGNVLASRVHQDLQHFPCIKVKLKVQKRDTDDTKSLSLSIKLEKTNSRQSTSRAFAPRF
PKVKDEAWWLVLGNTSTSELYALKRVSFSDRLVTQMDLPSSLSTFQGIKLMLVSDCYIGF
EQEHSIEEIAMSQDIRNNN
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaagatattggagcactcattcgctatcctcacggaggaaagttggttaag
caatatttaggttatttcccatggattcaattatcggcaactgtaagtccaatcaccagg
actgttttaaaggtggatctgctcataactccagacttcatatggaaagatcgttttcat
ggcactgcacaacgttggtggattcttgttgaggactctgagaatgatcacatttatcat
tcagagcttttcactttgacaaagcggatggctcgaggagagcctcagaagctcacgttc
actgtgccaatttttgaaccacaccctccacaatattatattcgtgctgtttctgattct
tggctgcatgcagaagctttctacactatttcattccataatctagctctgccagaggct
cgtacttcccacacagaacttctggatttaaaaccactccctgtgacctcgcttgggaac
aatatttatgaaggcttgtacaacttctcacattttaatcctatacaaacacagattttt
catgttctctatcacacagacaacaatgttcttttaggagctcccactggtagtgggaaa
actatatctgctgaacttgctatgcttcacctcttcaatacccagcctgatatgaaggta
atttacatagcaccgttgaaggctattgtacgagaaaggatgcatgattggagaaagcgt
cttgtctctcagcttgggaaaaaaatggttgaaatgactggagattatactccagattta
atggccctcttgtcagcagacatcattatatctacccctgagaagtgggatggtatcagt
cgaaattggcatagccgaagctatgtaacaaaggttgggcttatgattttggatgagatt
cacttacttggagctgatcgtggacccatccttgaggttattgtttcgaggatgagatac
atatcatcccaaacagaacgggcagtgcgtttcgtaggcctttctactgctttggcaaat
gcaggtgatttggctgattggttaggagttggtgaaattggactcttcaacttcaagcca
agtgtgaggcctgtgcctctggaagtacatattcagggatatcctggaaagtactattgc
ccaaggatgaatagcatgaataaaccagcatatgctgctatatgcacacattcacctaca
aaaccagtgctaatttttgtttcctctcgtcgccagactaggcttactgcacttgacctt
attcagtttgcagctgcagatgaatatccaaggcagtttctgagtatgacagatgaaaca
ctgcagatggttctctctcaggtcactgatcagaacctgaggcacaccttacaatttggc
attgggttacatcatgcaggattaaatgataaagacaggtcccttgttgaggaactcttt
gcaaacaacaagatccaggtgttggtatgtacaagtacacttgcttggggcgtgaatctt
cctgctcatctggttattatcaagggaactgaatactatgatggaaagacaaagagatat
gttgattttcctatcacagatattttgcaaatgatgggtcgtgcaggccgcccacagtat
gatcaacatggaaaagctgtcattcttgtccatgaaccaaaaaagagcttctataaaaag
tttttgtacgaaccatttcctgttgaaagcagtctgaaggagcagttgcatgatcacctc
aatgcagagatagttactggcacaatttgccataaagaggatgcaatgcattatattaca
tggacatacttgttccgtcgattgatggttaatccagcctactatggtctagagagtgca
gaacctgaaactctgagttcatacttatccagattagtgcagaacacatttgaggatctg
gaagatagtggatgcatcaagatgaacgaagacaatgtggaatctatgatgttgggcatg
atagcatcacagtattacctcagctacatgactttatcaatgtttggatcaaatatagga
ccagatacatctcttgaagtgtttttgcatattttatctggtgcatctgaatatgatgaa
cttcctgtgagacacaacgaggaaaactataatgaagcattgtctgggagagttcggtat
atggtggacaagagccgcttggatgatccccatgtcaaagcaaatctgctatttcaggca
catttttcccagttggagttgccaatcagtgattatacaacagatttgaagtcagtgttg
gatcaaagcattcgcataatacaggccatgatagatatttgtgctaacagtggatggctt
ctaagctcaattacttgcatgcatcttttgcaaatggtcatgcagggtttgtggtttgat
aaagattcttccctgtggatgttgccctgcatgaatgctgatcttgtagcctcattgagc
aaaaaaggaatctccagtgttcagcagctattagatcttcccaaggcaactttgcaggct
atgattggaaatgttctggcttcaagagtacatcaggatttacagcattttccttgcatt
aaggtgaagctaaaagttcagaaaagggacactgatgatacaaagtctctttccttgagc
atcaaattggagaagaccaattctaggcaaagcacatcaagggcttttgctcctagattc
cctaaggtaaaagatgaagcatggtggttagttcttggtaacacatccacctctgaatta
tatgctctgaagagagtttctttctctgatcgcttggttactcaaatggatttaccatca
tccttaagtactttccaggggataaaattgatgttggtttctgattgttacattggtttt
gaacaagaacattcaattgaagaaatagccatgtctcaagatattcgaaacaacaattga
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