Jatropha curcas (Barbados nut): 105641101
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Entry
105641101 CDS
T03922
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105641101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105641101
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105641101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
WHD_SOWAH
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
105641101
NCBI-ProteinID:
XP_012080961
UniProt:
A0A067K2W8
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENLEKCYDCGVTITRLIREYN
VRASPITDKNYFIGRFVTGLPSFSRKKNADSKWSIHKEGLQGRQLTDALREKYKNRPWLL
EDETGQSQYQGHLEGSQSATYYLLILQGKEFVAIPAGSWYNFNKVAHYKQLTLEEAEEKM
KNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDSGTAGGKGRRKTAGDDEGGNVSDKG
EEVEEEETARKNRLGLRRFDGDDEEEGQKGSDHDMDDDDGEKGDDWEHEEIFTDDDEAVG
NDPEEREDLAPELPAPPEIKQDEDDEGEENEEGGLSKSGKELKKLLGKAGGLSDSDDDDD
DDMDDEISVLAPKKKDTPKEEPTESNHAKSMPSGSAKGNQSASKSAKGKRKSNGDDAKTS
NSVPQKKVKAENELKHTVKEESVAATKSNVTSKVVPSSLKTESTSSIGPVSEEEIRAVLS
QNGPVTTQELVSRFKAKLKCRQDKEAFAATLKRISRIQKTNESSYVVLRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgatcttctcttaaagccatcgtgcagtggatgtggatcgaccacagatttg
tatggaagcaattgcaagcacatgactctttgcttaacttgtggcaaaaccatggcggag
aaccttgagaaatgctatgattgtggcgtcaccattactcgtttgattcgagaatataat
gttcgggccagtcctatcaccgacaagaactactttattggtagatttgttacaggattg
cctagtttttctagaaagaaaaatgctgatagtaaatggtctattcataaagaaggacta
caaggacgtcaacttactgatgctttgcgggagaagtacaagaacaggccttggctgttg
gaggatgaaactggccagtctcagtaccaaggtcatctcgaaggttcgcaatcagcaact
tactacctgttgatactgcagggaaaagagtttgttgctatccctgctggttcttggtat
aattttaacaaagttgcacattacaagcaacttaccttggaggaagcagaagagaagatg
aagaacaggagaaagactgcagatggatatgaaagatggatgatgaaagctgcaaataat
ggggctgctgcatttggtgaagtggagaagtttgatgataaggatagtggtacagctggt
ggaaagggacgcagaaaaacagctggtgatgatgaaggcggcaatgtttctgacaaggga
gaggaagttgaagaagaggagacagcacggaagaatagacttggacttcgcagatttgat
ggtgatgatgaagaggaaggtcaaaaggggagtgatcatgatatggatgatgatgatggc
gagaagggtgatgattgggagcatgaagagattttcactgatgatgatgaagcagttggt
aatgatccagaggaacgggaagatctggctcctgagcttcctgctcctccagaaatcaag
caggatgaagatgatgagggcgaagagaatgaagaaggtggattgagcaaatctgggaaa
gagttgaagaagcttcttgggaaagctggtggactcagtgattcagatgatgatgatgat
gatgatatggatgatgagatttctgtgctggctccgaagaagaaggatacacctaaggag
gaacctactgaaagtaatcatgcaaaatcaatgccttctggttctgctaagggaaatcaa
tctgcttccaagtcagcaaagggaaaaagaaaatcaaatggtgatgatgcaaaaacatct
aacagtgtgcctcaaaagaaggtcaaggcagaaaatgaactgaaacataccgtgaaagaa
gaaagtgttgctgctactaaaagtaacgtgacttccaaggtggtaccatcatctctgaaa
acagaatcaacgtcatccattggacctgtctcagaagaagagattagggctgtcttgtcg
caaaatggacctgtgactacacaagaacttgtttctcggtttaaagcgaagctaaaatgc
cgccaggacaaggaagcttttgcagctactctaaagagaatttctaggattcagaagacc
aatgaatctagttatgttgtattgagaaggtag
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