Jatropha curcas (Barbados nut): 105641121
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Entry
105641121 CDS
T03922
Name
(RefSeq) probable pectate lyase 13 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105641121
Enzymes [BR:
jcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105641121
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
105641121
NCBI-ProteinID:
XP_012080989
UniProt:
A0A067KE09
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MLPTICILLICLSTSSLLCIRASSFNLSLPHQHPDPESVAEDIQRRVNASISTRQLLSTQ
CQTGNPIDDCWRCDSNWGANRQRLADCAIGFGQGSLGGFGGQIYVVTDSSDHDPANPTPG
TLRYGVIQNEPLWITFSTSMTIKLKHELIFNSYKTIDGRGANVYITGNGCLTLQYVSHII
IHNIHIHNCKPSGNTVIAASPTHAGWRGRSDGDGISIFGSQKIWIDHCSLSYCTDGLIDA
IMGSTGITISNNYFSHHNEVMLLGHDDRYVLDSGMQVTIAFNRFGAGLVQRMPRCRRGYI
HVVNNDFTYWKMYAIGGSASPTINSQGNRYIAPADPDAKEVTKRVDTDEGDWADWNWRTD
GDIMVNGAFFVPSGAGLSAQYAKASSVEPKSAGLINQLTMNAGVLGGPREDNGDVPTPGF
SGGGTTTGTTNTGTAGSTGGDADYFGMIFGSGGAPPPTSSLSSIILSILIILILHTCNLG
AILSFPLLSSL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctaccatctgcattcttttaatttgcctctctacttcttcccttctctgtatt
agagcttcttctttcaatctctcccttccacaccaacaccctgaccctgaatctgttgct
gaagatattcaaaggagagtcaatgcatctatatcaacaagacaacttttgtcgactcaa
tgccaaaccgggaacccaatcgacgattgctggcgatgcgacagcaactggggggccaac
cgccaacgcttagccgactgcgccatcggcttcggccaaggttcattaggcggctttggc
ggtcagatctatgtcgtcactgattcctccgatcatgacccagctaatccaactccggga
actctccggtacggcgttatccaaaatgagccgctctggatcaccttctccactagcatg
accatcaagcttaaacacgaactgatcttcaacagttacaaaacaatcgacggtcgtgga
gctaacgtctatattactggcaatggatgtctgactctacagtatgtctcccatataata
atccacaacatccacatccataattgtaaaccgtcggggaatactgttatagccgcatcc
ccaacgcatgctgggtggagaggcagatcggacggcgatggtatatctatttttggatca
cagaaaatatggattgatcactgctctttatcatactgtacagatgggttgatcgatgct
ataatggggtccactgggattacaatatcaaacaactatttttctcatcataatgaagtg
atgctattgggacacgatgataggtacgttttggactcgggaatgcaagttaccatagcg
tttaaccgattcggtgctgggctggtgcagcgtatgcctcggtgtagacgcgggtacata
cacgtggtcaataatgatttcacatattggaagatgtacgcaatcggcggtagcgctagc
cctaccattaacagtcagggtaatcggtatattgctccggcggatcctgatgccaaagag
gtgactaagcgcgtggacacagacgaaggagattgggcagattggaattggaggacggat
ggggacataatggtcaatggagcattttttgtgccctctggagctggattaagcgctcag
tatgcgaaagcgtccagtgtggaacccaaatctgctggcttaattaaccaactaactatg
aacgctggtgtcttgggtgggcccagagaagacaatggggacgttcctactccaggtttc
agcggtggcgggaccaccacgggcaccaccaacacaggaacggcgggttccactgggggt
gacgcagactacttcggaatgatattcgggagcggcggcgctccaccgcccacttcttct
cttagctcaataattttgtctatcttaattattttaatattgcacacttgcaacctcggt
gccatattatcctttccattattgtcgtcgttatag
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