Jatropha curcas (Barbados nut): 105641778
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Entry
105641778 CDS
T03922
Name
(RefSeq) SWI/SNF complex subunit SWI3D isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105641778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105641778
03036 Chromosome and associated proteins [BR:
jcu03036
]
105641778
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105641778
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105641778
PBAF complex
105641778
GBAF(ncBAF) complex
105641778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
105641778
NCBI-ProteinID:
XP_012081763
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MEEKPAGSSATAGADSPASAEPASSRRRAGGLKRKANATSVNSSSSTPSKRLTREKAAIS
HPPIHNGGPLTRARQGPNNLGSSASAAAAGAGFKLEDKVALSASEAATVAALEEEISKLE
KLKASIEAEFEGIRSRDSNAHVVPNHCGWFSWSKIHLLEERALPSFFNGKSQTRTPDTYM
KIRNWIVKKFHANPNVQIELKDLSELEVADLDAKQEVLEFLDYWGLINFHPFPQIDSSAN
AYSDEAAKKDSLLEKLFHFETIQPSPLVLHKPNLSTPSVPSGLFPESSIAEDLVQPEGPA
VEYHCNSCSADCSRKRYHCQKQADYDLCADCFSNRKFGSDMSSSDFILMEPADPGLSGGK
WTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPTEDAFFDCDDDVDGSSK
ETTDQPTIVDDASVPKDGIEISEEKTGAKEDFPLALPMEASKQEDASELKVVQETAKLGN
ANEAIVGEETTKSKDTSEVKAAQHLGENLAVKALTEAFQAIGYLHTPEIQLSFAEVGNPV
MALAAFLARLVGSDVSTASSGCSLKSLSSDSPGMQLAARHCFLLEDPPDNQQEPAEPDCS
ATETANQDAQNFNQEGQAQKGNNADGGELSIDNSNRKIEDSAAEEKQPLNSPSDKSTENV
NTANEAGTAVSHEVEHGKLKESSDSVLQKEPQINVLKESNEMPSNSECPPSSTKETEGTS
TTVPSQPKEVNKDVEMVSNSTPAENDEPCPSVASVPVEEESQTAETSKDVDMISDSLPAE
KNEQQQPVKSNSVRDSTPSIEAPKDVDMLSSMTSELKEPPQPVAPNSVVENGATKAEDQK
GSKRESADFKQNDDNSIDKVKRAAVSALSAAAVKAKLLANQEEDQIRQLAASLIEKQLRK
LETKLAFFNEMDHVIMRVREQLDRSKQKLYHERAQIIAARLGLPASSSRGMPPQLPTNRI
AMNFANSIPRPPMSMTSQRPPIARPMGTLAPTPSNTFVSTTAGSSIRPSGQDKLSSVGMK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaaccagcggggagctcggccacggcgggtgccgactcaccggcatcagcc
gagccagcgtcgtcacggaggcgggcgggagggctgaagaggaaagccaacgcgacgtct
gtaaacagctcttcgtctacaccgtcgaaacggctcactcgcgagaaggccgcgatctct
cacccgccgatccacaacggtggtccgttgaccagagcccgccagggccccaacaatttg
ggttcttcagcttctgctgcggctgcaggcgctggatttaagcttgaggataaggttgct
ctgtctgcgtcggaggctgcgacggtggcagcattggaggaggagataagtaagttggag
aagttgaaagcatctatagaagcggagtttgagggtattagatctagagattctaatgct
catgtagtgcctaatcattgcggttggttttcatggtcaaaaattcacctccttgaggag
cgtgcattaccttcattctttaatgggaagtcccaaacccggacacctgatacctacatg
aagatacgaaattggattgtgaaaaaatttcatgcaaatccaaatgtacagattgaatta
aaagatctttctgagcttgaagttgcagacctagatgcaaagcaagaggtgcttgaattc
ttggactactggggattgattaatttccacccattcccacaaatagattcttctgccaat
gcttatagtgatgaagcagcaaagaaggattcattgcttgagaagttatttcactttgaa
accattcaaccatcccctcttgttcttcataagcctaatctatcaactccatctgtacca
tctgggttatttcctgagtcttcaattgcagaagatttggtgcagcctgaggggccagct
gttgagtaccactgcaattcctgttcagctgattgctctcgtaaacgctaccattgccag
aagcaggcagattatgatttgtgtgctgattgctttagtaaccggaaatttggctcagac
atgtcttcatcagattttattctcatggagcctgctgatcctggcttaagcggtggaaag
tggacagatcaggagaccctacttctccttgaggcattggaactttataaagaaaactgg
aatgagattgcagagcatgttgccacaaaaactaaagctcaatgtatattgcactttgtt
caaatgccaactgaggatgctttttttgactgtgatgatgatgtagatgggagttccaaa
gaaactacagatcagcctacaattgttgatgatgcatctgttcctaaagatgggattgaa
attagtgaggaaaaaactggtgctaaggaggactttcctctggctttgccaatggaagct
tccaaacaagaagatgcaagtgaactaaaagttgtccaggaaactgcaaagctgggcaat
gccaatgaagctatagttggtgaggagactaccaaatcaaaagatactagtgaagtgaag
gctgcccagcatttgggtgaaaatttggcagtcaaagctctcactgaagcatttcaagct
attggttatcttcatactcctgaaatccaactatcatttgctgaagttggaaatcctgta
atggctttggcagcatttttggcaagactggtgggaagtgatgtttctactgcttcatct
ggctgctctttgaaatcattaagtagtgattctccaggcatgcagctggcagcaaggcat
tgctttcttttggaagatccaccagataaccagcaggaaccagctgaaccggattgcagt
gccactgaaacggctaatcaagatgctcaaaacttcaaccaggagggccaagcccagaag
ggaaataatgctgatggcggagagttgtcaattgataacagtaacaggaaaattgaagat
tctgctgcagaagaaaagcaacctctgaattctccaagtgacaaatccactgagaatgta
aacactgcaaacgaagcaggcactgcagtttctcatgaggttgaacatggtaagttgaag
gaatctagcgactcggtgttgcaaaaggagccccaaataaatgttttaaaagaatcaaat
gagatgccatccaattccgagtgtccaccaagttctacgaaggaaacagaaggaacttcg
acgactgtgccttctcagcctaaagaggttaataaagatgtagaaatggtgtctaattca
acacctgctgaaaatgatgagccttgtccatcagttgcatcagtgccagttgaagaggaa
tctcaaactgcagaaacgtcaaaggacgtagatatgatctcagactctctgcctgcagag
aagaatgaacaacagcaaccagtaaaatcaaattcagtacgagactctaccccgtctata
gaggcaccaaaggatgtagacatgttatcttcaatgacatcagaattaaaagagcctccg
cagccagttgcaccaaattcagtggttgaaaatggagcgactaaagctgaggaccaaaaa
ggcagtaaaagagagagtgctgattttaagcagaatgatgataatagcattgataaagta
aagcgtgctgcagtttctgctctttcggcagcagcagtgaaggcaaagcttctcgcaaac
caggaagaagaccaaatacgacaacttgctgcatcattgatagaaaagcagttgcgtaag
ctggaaacaaaactggctttctttaatgaaatggaccatgtaataatgagagttagggag
caacttgacaggtcaaagcaaaagctgtatcatgagcgagcacagataattgcagcgcgg
cttgggctaccagcatcctcatctagaggaatgccgccacaattacccaccaacagaatt
gcaatgaattttgcaaattcaattccaagaccccctatgagcatgacttcccaaaggcca
ccaattgcaagacccatggggacattagctcccaccccttctaatacatttgtatcaact
acagctggaagttcaattcggccttctggccaggacaaactgtcttcagttgggatgaag
tag
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integrated database retrieval system
