Jatropha curcas (Barbados nut): 105641849
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Entry
105641849 CDS
T03922
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51 isoform X2
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jcu03041
]
105641849
03009 Ribosome biogenesis [BR:
jcu03009
]
105641849
Enzymes [BR:
jcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105641849
Spliceosome [BR:
jcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105641849
Ribosome biogenesis [BR:
jcu03009
]
Eukaryotic type
90S particles
Helicases
105641849
Pre-60S particles
105641849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Motif
Other DBs
NCBI-GeneID:
105641849
NCBI-ProteinID:
XP_012081859
UniProt:
A0A067KB69
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MAVIEKEKKPHASQDEENKKNRKRKRNRANKARVTEEPEENQIEEEEVENEDEEEREIES
VKLKKKEKKKKKNKKVENEVKNSEEQSAEEELDEEDTKKEEAEGNDKEEKKVKSGSGIMS
TESFESLGLSEPTFKAIQEMGFQYLTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPA
VELLYNVRFTPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARKGEAER
IVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKLLPKN
RQTALFSATQTKKVEDLARLSFQTTPIYIDVDDGRTKVTNEGLQQGYCVVPSSKRFILLY
SFLKRNLSKKVMVFFSSCNSVKFHSELLRYIQVECFDIHGKQKQQKRTSTFFDFCKAEKG
ILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQF
LRYLKAAKVPVKEYEFDDKKLANVQSHLEKLVSNNYYLNKSAKDAYRSYILAYNSHSMKD
IFNVHRLDLQAVASSFCFSCPPKVNLNIDSSASKFRKKAHKGSRNGFSESNPYGRQRDEE
DKRQFVRH
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggccgtaatagagaaggaaaagaagccacatgcttctcaggatgaagaaaataagaag
aataggaagcgaaagcgaaaccgagcgaacaaagctcgagtcacagaagaaccagaggaa
aatcaaattgaagaagaagaagttgaaaatgaagacgaggaggagagagaaatcgagagt
gtgaaattaaagaagaaagagaagaagaaaaagaagaataagaaggtggagaatgaggtg
aagaacagtgaggagcagagtgctgaggaagagttggatgaagaagacacgaagaaggaa
gaagcggagggaaatgacaaggaggagaagaaggtgaagagcgggagtggcattatgagt
acagagtccttcgaatctttaggattatctgagcccaccttcaaggctattcaggagatg
ggatttcagtatctaactcagattcaagctagagctattccgccccttctaattggcaaa
gatgttcttggtgctgcaaggactggttctgggaaaacacttgctttcttaataccagct
gtggagttgttatataatgttcgtttcacccctcgcaatggaacaggcgttgttgtcatt
tgccctacaagagaacttgccatacagactcatgctgtggccaaggaccttctcaaatac
cactcgcagacacttggcttggttattgggggttctgctagaaaaggagaagcagaacgt
attgttaaaggggtaaatttattggttgcaacccctggtcgtcttcttgatcatcttcaa
aatacgaagggttttatatataagaatttgaagtgcctcatgatcgatgaagcagatagg
atactggaggcgaactttgaggaagaaatgaaacaaatcatcaagcttctaccgaagaat
agacaaactgctttattttcggcaactcaaactaagaaggtcgaggatcttgcccgctta
tcgtttcagacaacgcccatctatattgatgtggatgatggaagaactaaggtcacaaat
gaaggtttgcagcagggctattgtgtagtgcctagttccaagagatttattcttctctac
tcttttctaaagaggaacttatcgaagaaagtaatggtcttcttctcttcatgtaactcc
gtaaaattccattccgaacttctcagatacattcaggtcgaatgttttgacatccatggg
aagcaaaagcaacaaaaacgaacctctaccttttttgatttctgcaaagcagagaagggg
atattgctatgtactgatgtagcagcacgtggacttgatattcctgctgtggactggata
gtgcagtatgatcctcctgatgaacccaaggagtacattcatagggttggtcgtacagcc
cgtggagaaggaggaaaaggaaatgctctgctttttctgattccagaagagttgcaattt
ctgcgttatctgaaggctgcaaaagtccctgttaaagaatatgaatttgatgataagaag
ctagcaaatgttcagtctcatctggaaaagttggtcagtaacaattattatttgaataag
tctgctaaagatgcatatagatcctacatattggcctacaattcacactctatgaaagac
atatttaatgtccatcgccttgatctgcaggcggttgcatcttcattttgcttttcttgt
ccaccaaaggtgaatctgaacattgacagcagtgcctccaaatttagaaagaaggcacat
aaaggaagtcgaaatggatttagcgagagcaacccttatggaaggcagagggatgaagaa
gataaacgacaattcgtaagacattag
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