Jatropha curcas (Barbados nut): 105641896
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Entry
105641896 CDS
T03922
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Module
jcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105641896
Enzymes [BR:
jcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105641896
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
105641896
NCBI-ProteinID:
XP_037495901
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All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MDVIDERVILTIRYLFSPKTHLSYQQSFLSYHIKITRTMKYNIFVLLLISLTSSMAMAAS
RYNIVSYGAKPGGRTDSSKALLAAWTQACASREAATLYVPKGKFAVSKTVSFDGPCKNNA
IVFQINGTLSAPSDYNVIGNSEEWIIFRHVKGVTVSGGILDGQGSGLWSCKNSGKSCPTG
ATSLKFANSNNIIITGLTSINSQMFHIVINECQDVTVQGAKISALEESPNTDGIHIGGST
KVNIFDSNIGTGDDCVSVGPGSSNLWIQKVICGPGHGISIGSLGKDVQEKGVRNVTVTNC
TFTGTKNGVRIKTWGRPSNSFATDIHFQHAIINNVKNPIIIDQNYCDGNNNCPRQASGVK
ISDVTYKNIHGSSATEVAVKFDCSKTHPCSGIKLQDIELTYHNQPTKATCTNADGIALGI
LQPTSCL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgattgatgagagagtaattctcactatacgctatcttttttctccgaaaact
catctctcttatcaacaatcttttctctcttatcatataaaaataactcgtacaatgaag
tacaatatttttgtacttctcttaatttccttaacctcgtctatggccatggcagcctca
cgatacaatatagttagttatggcgccaaacctggtggccgaacagattcaagcaaggcc
ttgcttgctgcttggacacaagcatgtgcctccagagaagcagccaccctttatgttcca
aaagggaaatttgctgtaagcaagacagtgtcatttgacggtccttgcaagaacaacgct
attgtttttcagataaatggtactctttcggctccttcagattataatgtgattggtaat
tcagaggaatggataatatttagacatgttaaaggggttacagtttctggtggtattctt
gatggacaaggctctggattgtggtcttgcaagaactccggcaagagttgccctaccggt
gcaacgtcacttaaatttgcaaattcaaacaacattataatcacgggattaacatctata
aacagccaaatgtttcacattgtcatcaacgaatgccaagacgtcacagtgcaaggtgcg
aaaatctcagcactcgaagagagccctaacaccgatggaattcacatcggagggtcgacc
aaagtcaacattttcgattctaatattggaacaggggatgactgtgtatcagttgggcct
ggctcctctaatttatggatccaaaaagttatatgtggacctggacatggaattagcatt
ggaagtttgggaaaggacgttcaggaaaagggagtgagaaatgttaccgttacgaattgt
acattcactggcactaaaaatggcgttcgaatcaagacttgggggagacctagcaatagt
tttgctacagacattcatttccaacatgctatcatcaacaatgttaaaaatccgattata
attgaccaaaattactgcgatggcaataacaattgcccaaggcaggcttctggagtaaaa
attagtgatgtgacctacaaaaatatccatggatcatcagcaacagaagttgcagttaaa
tttgactgcagtaaaacgcacccatgcagtgggattaaattacaagatatagagctcacg
taccataaccaaccaactaaagcaacgtgtaccaatgctgatggaattgctttaggcatt
cttcaacccacaagctgcctttaa
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