Jatropha curcas (Barbados nut): 105641901
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Entry
105641901 CDS
T03922
Name
(RefSeq) LOW QUALITY PROTEIN: polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu00040
Pentose and glucuronate interconversions
jcu01100
Metabolic pathways
Module
jcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105641901
Enzymes [BR:
jcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
105641901
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix_3
Motif
Other DBs
NCBI-GeneID:
105641901
NCBI-ProteinID:
XP_012081941
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MKETNGWQYLNTLFSLPLSFVFLIPXASNGAYNVMNFGAKADGKTDSTQAFLRAWSSACR
STRVATVYVPKGNFLVKPIVFSGPCKSKILFWIDGRILAPTNYWSFGSSGFWILFYKVSG
VDIYGGTIDARGGGFWACRKAGNVCPPGARSISFVASRNIDVKGLSSINSQMFHIAISHC
HNIMLQNVKIRAPSLSPNTDGIHMQSSTGITITDSSFKTGDDCISIGPGSNNIWIQRIAC
GPGHGISIGSLAAHTREGGVQNVTVTGVVFTGTQNGVRIKSWGRPSSGFAKDIVFQNIIM
KNTYNPIIIDQEYCPSGHGCPNQSSGVKISGVTYKRIRGTSATKVAMNFICSSSDPCTGI
KLHDIKLTYFNTANATSSCTNAHGSNAGFVIPASCF
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacaaatggctggcaataccttaatacattattttctcttcctctttctttc
gttttccttattccannagcatcaaatggggcatacaatgttatgaactttggggcaaaa
gcagatggcaaaactgattctacacaggcatttcttagggcatggtcctctgcatgtagg
tcaacaagggtagccaccgtttatgttcctaaagggaatttcttggtgaaaccaatagta
tttagcggtccatgcaaaagtaaaatcttgttttggattgatgggaggattttagcacca
acaaattattggagttttgggagttctggattttggatattgttttataaggttagtggg
gttgatatctatggtggcactattgatgctaggggaggtggcttttgggcttgcaggaaa
gctggaaacgtttgtcctcctggagctaggtccatatcatttgtggcgtcaagaaacatt
gatgttaaaggattgagttcaatcaacagccaaatgtttcacatagccattagccattgc
cacaacattatgcttcaaaacgtcaagattagagccccaagtttaagtcccaacaccgat
gggatccacatgcaatcttctactgggattaccattacagacagctcctttaagactgga
gatgattgtatttctataggtccaggctccaacaacatttggattcaacgcattgcctgt
ggccctggacatggaatcagtattggaagtctagctgcacataccagagaaggtggtgtc
caaaacgtgacagtaacaggtgtcgtattcacaggcactcaaaatggagtcagaatcaaa
tcatggggtagacccagctctggatttgctaaagacattgttttccaaaacatcataatg
aaaaatacctataatccaatcatcatcgatcaggaatattgcccaagtggccatggttgc
cctaaccagagttctggagtgaagataagtggggtgacgtacaagaggataaggggaaca
tcagccacaaaagtagcaatgaattttatatgcagttcaagtgatccatgcacaggaatc
aaattgcatgacattaagttgacatattttaatacagctaatgcgacatcgtcttgtact
aatgcacatgggagcaatgcaggcttcgttattcctgcaagttgtttctaa
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